Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.55□□□□□ -1.68
TNFP01375 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFP01375 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.55□□□□□ -1.68
TNFP01375 AC026523.2-201ENST00000625039 7739 ntBASIC4.54□□□□□ -1.68
TNFP01375 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFP01375 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFP01375 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFP01375 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFP01375 U3.22-201ENST00000391120 215 ntBASIC4.54□□□□□ -1.68
TNFP01375 NACAP7-201ENST00000407371 609 ntBASIC4.54□□□□□ -1.68
TNFP01375 TMBIM7P-201ENST00000418074 855 ntBASIC4.54□□□□□ -1.68
TNFP01375 GNG5P5-201ENST00000420444 220 ntBASIC4.54□□□□□ -1.68
TNFP01375 ELOCP3-201ENST00000439303 348 ntBASIC4.54□□□□□ -1.68
TNFP01375 AL136455.1-201ENST00000441083 1240 ntBASIC4.54□□□□□ -1.68
TNFP01375 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFP01375 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFP01375 SCARNA10-201ENST00000459255 330 ntBASIC4.54□□□□□ -1.68
TNFP01375 RPS4XP12-201ENST00000461747 709 ntBASIC4.54□□□□□ -1.68
TNFP01375 RN7SL385P-201ENST00000468873 276 ntBASIC4.54□□□□□ -1.68
TNFP01375 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TNFP01375 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
TNFP01375 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TNFP01375 AC093840.1-201ENST00000511599 336 ntBASIC4.54□□□□□ -1.68
TNFP01375 SNORA26.10-201ENST00000516427 141 ntBASIC4.54□□□□□ -1.68
TNFP01375 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFP01375 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFP01375 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TNFP01375 AC105129.1-201ENST00000560250 297 ntBASIC4.54□□□□□ -1.68
TNFP01375 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.54□□□□□ -1.68
TNFP01375 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFP01375 MIR4697-201ENST00000582977 78 ntBASIC4.54□□□□□ -1.68
TNFP01375 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFP01375 AC008782.1-201ENST00000603386 430 ntBASIC4.54□□□□□ -1.68
TNFP01375 AC008833.1-201ENST00000611633 691 ntBASIC4.54□□□□□ -1.68
TNFP01375 MIR6758-201ENST00000620653 63 ntBASIC4.54□□□□□ -1.68
TNFP01375 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFP01375 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TNFP01375 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFP01375 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
TNFP01375 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TNFP01375 AC100778.3-201ENST00000580060 1750 ntBASIC4.53□□□□□ -1.68
TNFP01375 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFP01375 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFP01375 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFP01375 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 AC021146.4-201ENST00000309229 279 ntBASIC4.53□□□□□ -1.68
TNFP01375 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 RPL32P3-201ENST00000359025 275 ntBASIC4.53□□□□□ -1.68
TNFP01375 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFP01375 SDHCP2-201ENST00000398565 501 ntBASIC4.53□□□□□ -1.68
TNFP01375 ARL4AP5-201ENST00000404372 599 ntBASIC4.53□□□□□ -1.68
TNFP01375 ELOCP19-201ENST00000411919 318 ntBASIC4.53□□□□□ -1.68
TNFP01375 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFP01375 P2RY10P2-201ENST00000416730 913 ntBASIC4.53□□□□□ -1.68
TNFP01375 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFP01375 RPL7P57-201ENST00000423238 740 ntBASIC4.53□□□□□ -1.68
TNFP01375 YWHAZP2-201ENST00000440317 728 ntBASIC4.53□□□□□ -1.68
TNFP01375 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFP01375 AC015795.1-201ENST00000513669 327 ntBASIC4.53□□□□□ -1.68
TNFP01375 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFP01375 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFP01375 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFP01375 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFP01375 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFP01375 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFP01375 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 AL031119.1-201ENST00000404707 1879 ntBASIC4.53□□□□□ -1.68
TNFP01375 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFP01375 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 CASC19-206ENST00000641028 1430 ntBASIC4.53□□□□□ -1.68
TNFP01375 RAD17P1-201ENST00000418130 2042 ntBASIC4.53□□□□□ -1.68
TNFP01375 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
TNFP01375 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFP01375 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFP01375 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
TNFP01375 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
TNFP01375 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.52□□□□□ -1.69
TNFP01375 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFP01375 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TNFP01375 AC093849.1-201ENST00000563631 2209 ntBASIC4.52□□□□□ -1.69
TNFP01375 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TNFP01375 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFP01375 AC126755.2-208ENST00000327792 462 ntBASIC4.52□□□□□ -1.69
TNFP01375 AC138969.1-213ENST00000331436 462 ntBASIC4.52□□□□□ -1.69
TNFP01375 AC008549.2-201ENST00000333482 706 ntBASIC4.52□□□□□ -1.69
TNFP01375 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFP01375 EI24P3-201ENST00000399046 1062 ntBASIC4.52□□□□□ -1.69
TNFP01375 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.52□□□□□ -1.69
TNFP01375 RPS12P10-201ENST00000427031 377 ntBASIC4.52□□□□□ -1.69
TNFP01375 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.52□□□□□ -1.69
TNFP01375 AC073143.1-201ENST00000436316 395 ntBASIC4.52□□□□□ -1.69
TNFP01375 MRPL48P1-201ENST00000445390 636 ntBASIC4.52□□□□□ -1.69
TNFP01375 BTF3P6-201ENST00000448054 499 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms