Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.72□□□□□ -1.65
LSM1O15116 AC015908.5-201ENST00000623289 343 ntBASIC4.72□□□□□ -1.65
LSM1O15116 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LSM1O15116 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LSM1O15116 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LSM1O15116 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LSM1O15116 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LSM1O15116 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LSM1O15116 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LSM1O15116 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
LSM1O15116 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LSM1O15116 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LSM1O15116 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LSM1O15116 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LSM1O15116 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
LSM1O15116 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.71□□□□□ -1.66
LSM1O15116 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LSM1O15116 SNURFL-201ENST00000309296 343 ntBASIC4.71□□□□□ -1.66
LSM1O15116 RN7SKP104-201ENST00000362605 328 ntBASIC4.71□□□□□ -1.66
LSM1O15116 U3.35-201ENST00000408405 208 ntBASIC4.71□□□□□ -1.66
LSM1O15116 RPL21P108-201ENST00000413857 481 ntBASIC4.71□□□□□ -1.66
LSM1O15116 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.71□□□□□ -1.66
LSM1O15116 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.71□□□□□ -1.66
LSM1O15116 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LSM1O15116 NMNAT1P2-201ENST00000435192 860 ntBASIC4.71□□□□□ -1.66
LSM1O15116 MRPL48P1-201ENST00000445390 636 ntBASIC4.71□□□□□ -1.66
LSM1O15116 AC000111.2-201ENST00000448200 210 ntBASIC4.71□□□□□ -1.66
LSM1O15116 FAR2P1-206ENST00000449736 709 ntBASIC4.71□□□□□ -1.66
LSM1O15116 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.71□□□□□ -1.66
LSM1O15116 RPS6P4-201ENST00000494693 758 ntBASIC4.71□□□□□ -1.66
LSM1O15116 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.71□□□□□ -1.66
LSM1O15116 SNORD116-30-201ENST00000516468 85 ntBASIC4.71□□□□□ -1.66
LSM1O15116 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.71□□□□□ -1.66
LSM1O15116 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.71□□□□□ -1.66
LSM1O15116 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.71□□□□□ -1.66
LSM1O15116 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.71□□□□□ -1.66
LSM1O15116 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.71□□□□□ -1.66
LSM1O15116 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.71□□□□□ -1.66
LSM1O15116 OR11J2P-201ENST00000555298 907 ntBASIC4.71□□□□□ -1.66
LSM1O15116 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.71□□□□□ -1.66
LSM1O15116 AC011447.4-201ENST00000587562 111 ntBASIC4.71□□□□□ -1.66
LSM1O15116 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.71□□□□□ -1.66
LSM1O15116 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.71□□□□□ -1.66
LSM1O15116 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.71□□□□□ -1.66
LSM1O15116 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.71□□□□□ -1.66
LSM1O15116 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LSM1O15116 AC008115.4-201ENST00000619780 775 ntBASIC4.71□□□□□ -1.66
LSM1O15116 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
LSM1O15116 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LSM1O15116 AC090971.4-201ENST00000560291 1800 ntBASIC4.71□□□□□ -1.66
LSM1O15116 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LSM1O15116 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LSM1O15116 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
LSM1O15116 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
LSM1O15116 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.71□□□□□ -1.66
LSM1O15116 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LSM1O15116 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LSM1O15116 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LSM1O15116 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LSM1O15116 AC008758.3-201ENST00000507003 1829 ntBASIC4.7□□□□□ -1.66
LSM1O15116 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LSM1O15116 AC123912.3-201ENST00000600907 1367 ntBASIC4.7□□□□□ -1.66
LSM1O15116 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LSM1O15116 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.7□□□□□ -1.66
LSM1O15116 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LSM1O15116 RNA5SP435-201ENST00000364044 108 ntBASIC4.7□□□□□ -1.66
LSM1O15116 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
LSM1O15116 AL357515.1-201ENST00000402967 542 ntBASIC4.7□□□□□ -1.66
LSM1O15116 AL592291.1-201ENST00000403830 352 ntBASIC4.7□□□□□ -1.66
LSM1O15116 AL512422.1-201ENST00000407033 553 ntBASIC4.7□□□□□ -1.66
LSM1O15116 MIR1286-201ENST00000408112 78 ntBASIC4.7□□□□□ -1.66
LSM1O15116 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.7□□□□□ -1.66
LSM1O15116 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.7□□□□□ -1.66
LSM1O15116 RCC2P2-201ENST00000422174 918 ntBASIC4.7□□□□□ -1.66
LSM1O15116 CHEK2P5-201ENST00000423877 246 ntBASIC4.7□□□□□ -1.66
LSM1O15116 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.7□□□□□ -1.66
LSM1O15116 RAB28P3-201ENST00000448325 597 ntBASIC4.7□□□□□ -1.66
LSM1O15116 NDUFA5P8-201ENST00000449019 346 ntBASIC4.7□□□□□ -1.66
LSM1O15116 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.7□□□□□ -1.66
LSM1O15116 COPS8P2-201ENST00000473228 627 ntBASIC4.7□□□□□ -1.66
LSM1O15116 RN7SL174P-201ENST00000475578 289 ntBASIC4.7□□□□□ -1.66
LSM1O15116 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.7□□□□□ -1.66
LSM1O15116 AC104109.1-201ENST00000498563 436 ntBASIC4.7□□□□□ -1.66
LSM1O15116 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LSM1O15116 AC022616.2-201ENST00000523185 300 ntBASIC4.7□□□□□ -1.66
LSM1O15116 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.7□□□□□ -1.66
LSM1O15116 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LSM1O15116 OR1F2P-201ENST00000570470 933 ntBASIC4.7□□□□□ -1.66
LSM1O15116 TVP23CP2-201ENST00000571473 623 ntBASIC4.7□□□□□ -1.66
LSM1O15116 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.7□□□□□ -1.66
LSM1O15116 AC026368.1-201ENST00000614934 690 ntBASIC4.7□□□□□ -1.66
LSM1O15116 AL121873.1-201ENST00000616013 524 ntBASIC4.7□□□□□ -1.66
LSM1O15116 AL356274.1-201ENST00000617064 410 ntBASIC4.7□□□□□ -1.66
LSM1O15116 AC019206.1-201ENST00000621938 425 ntBASIC4.7□□□□□ -1.66
LSM1O15116 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.7□□□□□ -1.66
LSM1O15116 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LSM1O15116 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.7□□□□□ -1.66
LSM1O15116 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LSM1O15116 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LSM1O15116 AL356317.1-201ENST00000396110 1436 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms