Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PCDH17O14917 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH17O14917 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH17O14917 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH17O14917 RNU6-1339P-201ENST00000363574 91 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AC007618.1-201ENST00000366455 732 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDH17O14917 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDH17O14917 MIR525-201ENST00000384978 85 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AP002530.1-201ENST00000405705 684 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH17O14917 NPM1P4-201ENST00000414095 812 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 RPS7P9-201ENST00000414704 586 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.33□□□□□ -1.56
PCDH17O14917 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AL121878.1-201ENST00000418638 859 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 XKRYP1-201ENST00000423438 492 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH17O14917 RPS27AP6-201ENST00000427962 448 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 XKRYP2-201ENST00000432915 492 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 MTCYBP15-201ENST00000433123 1127 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH17O14917 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH17O14917 AP000936.3-201ENST00000438127 255 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH17O14917 RPL5P25-201ENST00000441148 775 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 MED28P3-201ENST00000444288 531 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AC023271.1-201ENST00000445936 1090 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AC068135.1-201ENST00000446164 246 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH17O14917 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH17O14917 AL139824.2-201ENST00000458731 1095 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 RN7SL583P-201ENST00000475692 287 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 RPL23AP37-201ENST00000479658 549 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 RPL32P33-201ENST00000487023 394 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AC108693.1-201ENST00000496068 432 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH17O14917 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH17O14917 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.33□□□□□ -1.56
PCDH17O14917 BX510359.5-201ENST00000515651 304 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 RNA5SP34-201ENST00000516887 130 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH17O14917 AC018442.3-201ENST00000523025 183 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH17O14917 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH17O14917 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH17O14917 AL390334.1-201ENST00000556395 450 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH17O14917 AC023824.3-201ENST00000569003 562 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 RBM22P1-201ENST00000578589 1214 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH17O14917 AC211433.2-201ENST00000608433 387 ntBASIC5.33□□□□□ -1.56
PCDH17O14917 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH17O14917 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH17O14917 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH17O14917 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH17O14917 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH17O14917 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH17O14917 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH17O14917 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH17O14917 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PCDH17O14917 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PCDH17O14917 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH17O14917 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PCDH17O14917 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH17O14917 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH17O14917 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH17O14917 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH17O14917 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH17O14917 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH17O14917 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH17O14917 MTCO1P6-201ENST00000481192 1384 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH17O14917 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH17O14917 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH17O14917 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PCDH17O14917 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH17O14917 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PCDH17O14917 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH17O14917 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
PCDH17O14917 RN7SKP124-201ENST00000364730 341 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 RNU4-2-201ENST00000365668 141 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 RNU6-224P-201ENST00000384055 107 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDH17O14917 MTCO1P56-201ENST00000401674 224 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 AL021331.1-201ENST00000402817 582 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 AL590290.1-201ENST00000405336 380 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 BTF3P8-201ENST00000414577 526 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH17O14917 TAF13P2-201ENST00000416876 286 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDH17O14917 RPS24P8-201ENST00000431490 402 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH17O14917 NPM1P18-201ENST00000434232 732 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDH17O14917 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDH17O14917 AL133445.1-201ENST00000467051 452 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 RN7SL188P-201ENST00000469842 285 ntBASIC5.32□□□□□ -1.56
PCDH17O14917 SIAH1P1-201ENST00000479411 923 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms