Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUX2O14529 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC8.07□□□□□ -1.12
CUX2O14529 AL669831.5-218ENST00000591702 1873 ntBASIC8.07□□□□□ -1.12
CUX2O14529 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC8.07□□□□□ -1.12
CUX2O14529 ALB-202ENST00000401494 1659 ntTSL 5 BASIC8.07□□□□□ -1.12
CUX2O14529 AC090017.1-201ENST00000548612 1779 ntBASIC8.07□□□□□ -1.12
CUX2O14529 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CUX2O14529 RNA5SP124-201ENST00000362739 110 ntBASIC8.06□□□□□ -1.12
CUX2O14529 LINC00993-201ENST00000420453 540 ntBASIC8.06□□□□□ -1.12
CUX2O14529 AC009963.4-201ENST00000448535 339 ntBASIC8.06□□□□□ -1.12
CUX2O14529 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC8.06□□□□□ -1.12
CUX2O14529 AC022884.2-201ENST00000578535 580 ntBASIC8.06□□□□□ -1.12
CUX2O14529 MIR6875-201ENST00000617506 72 ntBASIC8.06□□□□□ -1.12
CUX2O14529 RNA5SP439-201ENST00000617595 124 ntBASIC8.06□□□□□ -1.12
CUX2O14529 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUX2O14529 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUX2O14529 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CUX2O14529 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
CUX2O14529 AC008758.3-201ENST00000507003 1829 ntBASIC8.06□□□□□ -1.12
CUX2O14529 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.06□□□□□ -1.12
CUX2O14529 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CUX2O14529 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC8.06□□□□□ -1.12
CUX2O14529 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC8.06□□□□□ -1.12
CUX2O14529 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC8.06□□□□□ -1.12
CUX2O14529 RPS27AP11-201ENST00000402798 447 ntBASIC8.06□□□□□ -1.12
CUX2O14529 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC8.06□□□□□ -1.12
CUX2O14529 COX6CP13-201ENST00000428703 226 ntBASIC8.06□□□□□ -1.12
CUX2O14529 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC8.06□□□□□ -1.12
CUX2O14529 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.06□□□□□ -1.12
CUX2O14529 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC8.06□□□□□ -1.12
CUX2O14529 AP000827.1-201ENST00000527814 258 ntBASIC8.06□□□□□ -1.12
CUX2O14529 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.06□□□□□ -1.12
CUX2O14529 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC8.06□□□□□ -1.12
CUX2O14529 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC8.06□□□□□ -1.12
CUX2O14529 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC8.06□□□□□ -1.12
CUX2O14529 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUX2O14529 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUX2O14529 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.05□□□□□ -1.12
CUX2O14529 ST7-212ENST00000422922 1887 ntTSL 5 BASIC8.05□□□□□ -1.12
CUX2O14529 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CUX2O14529 AC239868.2-201ENST00000564237 4527 ntBASIC8.05□□□□□ -1.12
CUX2O14529 AL360270.2-201ENST00000562952 5985 ntBASIC8.05□□□□□ -1.12
CUX2O14529 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC8.05□□□□□ -1.12
CUX2O14529 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC8.05□□□□□ -1.12
CUX2O14529 AC092709.1-201ENST00000521355 1045 ntBASIC8.05□□□□□ -1.12
CUX2O14529 OR7E10P-201ENST00000526420 991 ntBASIC8.05□□□□□ -1.12
CUX2O14529 TRAV8-5-201ENST00000537369 341 ntBASIC8.05□□□□□ -1.12
CUX2O14529 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC8.05□□□□□ -1.12
CUX2O14529 MTCYBP13-201ENST00000578634 1093 ntBASIC8.05□□□□□ -1.12
CUX2O14529 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC8.05□□□□□ -1.12
CUX2O14529 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC8.05□□□□□ -1.12
CUX2O14529 TMEM30CP-203ENST00000637814 1035 ntBASIC8.05□□□□□ -1.12
CUX2O14529 AP001153.1-201ENST00000641024 338 ntBASIC8.05□□□□□ -1.12
CUX2O14529 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CUX2O14529 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
CUX2O14529 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUX2O14529 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.04□□□□□ -1.12
CUX2O14529 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CUX2O14529 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC8.04□□□□□ -1.12
CUX2O14529 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC8.04□□□□□ -1.12
CUX2O14529 SLC2A3P1-201ENST00000519666 1451 ntBASIC8.04□□□□□ -1.12
CUX2O14529 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUX2O14529 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.04□□□□□ -1.12
CUX2O14529 AL500522.2-201ENST00000448562 343 ntBASIC8.04□□□□□ -1.12
CUX2O14529 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC8.04□□□□□ -1.12
CUX2O14529 CAB39P1-201ENST00000502277 460 ntBASIC8.04□□□□□ -1.12
CUX2O14529 AC098799.1-201ENST00000504752 800 ntBASIC8.04□□□□□ -1.12
CUX2O14529 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC8.04□□□□□ -1.12
CUX2O14529 AC021193.1-201ENST00000511607 420 ntBASIC8.04□□□□□ -1.12
CUX2O14529 AC111000.6-201ENST00000514471 709 ntBASIC8.04□□□□□ -1.12
CUX2O14529 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC8.04□□□□□ -1.12
CUX2O14529 TRMT10BP1-201ENST00000519377 943 ntBASIC8.04□□□□□ -1.12
CUX2O14529 NDUFB4P11-201ENST00000560510 395 ntBASIC8.04□□□□□ -1.12
CUX2O14529 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC8.04□□□□□ -1.12
CUX2O14529 U3.53-201ENST00000628922 216 ntBASIC8.04□□□□□ -1.12
CUX2O14529 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
CUX2O14529 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC8.04□□□□□ -1.12
CUX2O14529 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CUX2O14529 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
CUX2O14529 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC8.03□□□□□ -1.12
CUX2O14529 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUX2O14529 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
CUX2O14529 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUX2O14529 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC8.03□□□□□ -1.12
CUX2O14529 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUX2O14529 LCMT1-AS2-202ENST00000565214 5666 ntBASIC8.03□□□□□ -1.12
CUX2O14529 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CUX2O14529 CGA-201ENST00000369582 729 ntTSL 5 BASIC8.03□□□□□ -1.12
CUX2O14529 MIR218-2-201ENST00000385006 110 ntBASIC8.03□□□□□ -1.12
CUX2O14529 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC8.03□□□□□ -1.12
CUX2O14529 RPL23AP38-201ENST00000423801 469 ntBASIC8.03□□□□□ -1.12
CUX2O14529 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC8.03□□□□□ -1.12
CUX2O14529 AC026427.2-201ENST00000506228 536 ntBASIC8.03□□□□□ -1.12
CUX2O14529 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC8.03□□□□□ -1.12
CUX2O14529 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.03□□□□□ -1.12
CUX2O14529 AC106782.4-201ENST00000568264 210 ntBASIC8.03□□□□□ -1.12
CUX2O14529 AL049794.2-201ENST00000616301 365 ntBASIC8.03□□□□□ -1.12
CUX2O14529 MIR8059-201ENST00000620427 81 ntBASIC8.03□□□□□ -1.12
CUX2O14529 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC8.03□□□□□ -1.12
CUX2O14529 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms