Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MIR7641-1-201ENST00000627518 61 ntBASIC4.95□□□□□ -1.62
NEDD8-MDP1E9PL57 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.95□□□□□ -1.62
NEDD8-MDP1E9PL57 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.95□□□□□ -1.62
NEDD8-MDP1E9PL57 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD8-MDP1E9PL57 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.95□□□□□ -1.62
NEDD8-MDP1E9PL57 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.95□□□□□ -1.62
NEDD8-MDP1E9PL57 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD8-MDP1E9PL57 RBPJP2-201ENST00000618187 1444 ntBASIC4.95□□□□□ -1.62
NEDD8-MDP1E9PL57 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
NEDD8-MDP1E9PL57 AP000542.2-201ENST00000623199 6179 ntBASIC4.95□□□□□ -1.62
NEDD8-MDP1E9PL57 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AC136624.1-201ENST00000400791 413 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 RNU6-564P-201ENST00000410983 104 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 DNAJC19P7-201ENST00000428811 344 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AC092162.1-201ENST00000432828 434 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 RPS17P8-201ENST00000434525 335 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 CEACAMP10-202ENST00000495431 496 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AC023424.1-201ENST00000496058 459 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 Y_RNA.719-201ENST00000517156 106 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 OR10D4P-201ENST00000525892 951 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 OR8A2P-201ENST00000528631 952 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 OR5M2P-201ENST00000529003 936 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AC040958.1-201ENST00000561102 201 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 RN7SL802P-201ENST00000577858 299 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 DPRXP4-201ENST00000578053 568 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AC209154.1-201ENST00000582156 337 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 MIR378J-201ENST00000611988 109 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 AL442639.1-201ENST00000625030 1899 ntBASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEDD8-MDP1E9PL57 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC093909.5-201ENST00000621839 1799 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AL022322.2-201ENST00000624072 20397 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 RN7SKP74-201ENST00000362849 309 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 RNU1-32P-201ENST00000363937 159 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 MTATP6P19-201ENST00000413797 659 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 LINC00993-201ENST00000420453 540 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 RN7SL481P-201ENST00000477764 299 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 RN7SL558P-201ENST00000497468 299 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 MYL12BP2-201ENST00000503948 512 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC073358.1-201ENST00000505671 684 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC111000.3-201ENST00000508057 576 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC091868.1-201ENST00000508746 304 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 MIR5699-201ENST00000578903 90 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 RN7SL690P-201ENST00000582087 240 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC020915.5-201ENST00000596836 964 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC009643.2-201ENST00000603543 1448 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms