Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 RNU6-249P-201ENST00000363016 102 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AL139039.2-201ENST00000407436 479 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC093162.1-201ENST00000419682 124 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 HSPA8P18-201ENST00000439846 1928 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC108463.1-201ENST00000450258 347 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 ISCUP1-201ENST00000454451 448 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 snoU13.20-201ENST00000459180 104 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 SCARNA22-201ENST00000503991 125 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC008638.1-201ENST00000506035 866 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 RNA5SP92-201ENST00000516437 110 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 IGLV2-28-201ENST00000520681 304 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 OR10G5P-201ENST00000532733 358 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC007448.1-201ENST00000582714 234 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC008759.1-201ENST00000589783 983 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC023762.1-201ENST00000603280 584 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC103792.1-201ENST00000603591 919 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 LINC01109-201ENST00000603837 3081 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC087283.1-201ENST00000604029 1074 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AL391358.1-201ENST00000605342 190 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AP002360.3-201ENST00000607673 710 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 SDR42E1P1-201ENST00000611327 477 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 AC010809.3-201ENST00000621310 641 ntBASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM49D1C9J1S8 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.59□□□□□ -1.68
TRIM49D1C9J1S8 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AL590763.1-201ENST00000398297 1545 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 CYCSP11-201ENST00000436426 315 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 TRY2P-201ENST00000448860 689 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 MYO5BP2-201ENST00000449815 1277 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC026348.1-201ENST00000462549 1053 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC008953.1-201ENST00000497334 318 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 BTF3P13-201ENST00000513224 490 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC084033.1-201ENST00000550830 633 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 GLRXP2-201ENST00000555594 321 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC011270.1-201ENST00000558606 583 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC105129.1-201ENST00000560250 297 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 RN7SL652P-201ENST00000577769 300 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 ADAD1P2-201ENST00000588476 646 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC013244.1-201ENST00000604279 193 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AL451049.1-201ENST00000608672 497 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC073575.2-201ENST00000614212 627 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 MIR7154-201ENST00000620673 73 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC079298.2-201ENST00000623885 459 ntBASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM49D1C9J1S8 AC087190.4-201ENST00000574616 8334 ntBASIC4.57□□□□□ -1.68
TRIM49D1C9J1S8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM49D1C9J1S8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM49D1C9J1S8 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TRIM49D1C9J1S8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM49D1C9J1S8 MTHFD2P5-201ENST00000320415 844 ntBASIC4.57□□□□□ -1.68
TRIM49D1C9J1S8 RNA5SP22-201ENST00000365393 109 ntBASIC4.57□□□□□ -1.68
TRIM49D1C9J1S8 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM49D1C9J1S8 RNU1-63P-201ENST00000383902 164 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms