Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC010503.3-201ENST00000594355 540 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 AL391684.1-202ENST00000641293 1636 ntBASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SMIM28A0A1B0GU29 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 A2MP1-204ENST00000566278 4130 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 DHX9P1-201ENST00000436565 3076 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 SDHCP2-201ENST00000398565 501 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 RPL7AP25-201ENST00000423357 805 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 NDUFA5P9-201ENST00000472609 340 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AP000827.1-201ENST00000527814 258 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AC084033.1-201ENST00000550830 633 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 MIR4277-201ENST00000578298 84 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AC125494.2-201ENST00000602431 657 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AC005191.1-201ENST00000603950 358 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AL356218.2-201ENST00000605264 187 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AP005212.4-201ENST00000614206 710 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AL121873.1-201ENST00000616013 524 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AP005019.3-201ENST00000620418 560 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AP003400.2-201ENST00000624036 666 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AP000473.2-201ENST00000602659 1537 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AC107068.1-201ENST00000563286 4218 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AC108751.5-201ENST00000492880 1336 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 AC233968.1-201ENST00000611212 1300 ntBASIC4.95□□□□□ -1.62
SMIM28A0A1B0GU29 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 MTCO1P15-201ENST00000529569 1526 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 IGKV7-3-201ENST00000357453 298 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 BX119904.3-201ENST00000428194 957 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 NDUFA5P1-201ENST00000433858 341 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 NMNAT1P2-201ENST00000435192 860 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 RPL23AP93-201ENST00000440847 484 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 AC012123.2-201ENST00000485809 248 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 AC025674.1-201ENST00000507074 324 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 HMGB3P16-201ENST00000508037 287 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 AC012409.3-201ENST00000611343 981 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 AL359757.1-201ENST00000623176 255 ntBASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.94□□□□□ -1.62
SMIM28A0A1B0GU29 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SMIM28A0A1B0GU29 RPL23AP59-201ENST00000399415 461 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms