Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC026458.1-201ENST00000564330 438 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 EEF1B2P1-201ENST00000567221 672 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC099489.2-201ENST00000574976 260 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AL589863.1-201ENST00000595383 631 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AP001554.1-201ENST00000604533 376 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AL360085.1-201ENST00000604713 532 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC087893.2-201ENST00000623272 255 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC021106.3-201ENST00000623925 531 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AL355480.4-201ENST00000626823 69 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC073488.7-201ENST00000633785 778 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC099654.6-201ENST00000636487 512 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 AC116158.1-201ENST00000560231 2129 ntBASIC6.94□□□□□ -1.3
PCDHGA11Q9Y5H2 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RNU1-39P-201ENST00000383897 165 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 SNORA70.8-201ENST00000384231 136 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RPS20P2-201ENST00000402520 389 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SKP32-201ENST00000410167 303 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AL357752.1-201ENST00000412817 349 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 MTATP6P18-201ENST00000417994 673 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 UQCRHP1-204ENST00000424609 274 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AL353729.1-201ENST00000425044 720 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 CYP4F32P-201ENST00000426492 504 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 FABP5P2-201ENST00000439042 408 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC079781.1-201ENST00000441505 394 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RNU7-136P-201ENST00000458819 69 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL647P-201ENST00000485429 300 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL797P-201ENST00000486314 297 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC096576.1-201ENST00000489014 359 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL445P-201ENST00000495609 293 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC01085-203ENST00000511195 326 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC008127.2-201ENST00000549925 1075 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AL121579.2-201ENST00000555466 590 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 UBE2CP4-201ENST00000561405 535 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC034105.3-201ENST00000565294 442 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC055876.1-202ENST00000567053 138 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL667P-201ENST00000582817 298 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RPSAP66-201ENST00000592196 606 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC008385.1-201ENST00000604421 355 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC113361.1-201ENST00000606683 543 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 Z98200.1-201ENST00000607298 470 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AC138649.5-201ENST00000637456 137 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 AP002907.1-201ENST00000606361 1430 ntBASIC6.93□□□□□ -1.3
PCDHGA11Q9Y5H2 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms