Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 NPM1P42-201ENST00000560329 862 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AC079171.1-201ENST00000568788 914 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AL390838.2-201ENST00000602394 274 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AL360012.1-201ENST00000602813 131 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AP003973.1-201ENST00000604639 691 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 HIRAP1-201ENST00000605318 787 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AC121761.2-201ENST00000617300 689 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AL357562.1-201ENST00000624911 609 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AC000095.2-202ENST00000637415 154 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AP001284.1-201ENST00000528393 2118 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AC025470.1-201ENST00000510053 2032 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AC027088.4-201ENST00000611559 1947 ntBASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PCDHGA6Q9Y5G7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.71□□□□□ -1.49
PCDHGA6Q9Y5G7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
PCDHGA6Q9Y5G7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHGA6Q9Y5G7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHGA6Q9Y5G7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHGA6Q9Y5G7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
PCDHGA6Q9Y5G7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
PCDHGA6Q9Y5G7 AC010329.2-201ENST00000595195 2737 ntBASIC5.71□□□□□ -1.49
PCDHGA6Q9Y5G7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC012254.3-201ENST00000591183 2117 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 SNORD1C-201ENST00000363315 78 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 MIR143-201ENST00000385300 106 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 GSTA8P-201ENST00000404253 637 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 RAP1BP1-201ENST00000412709 553 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 MRPS36P1-201ENST00000421291 307 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC073143.1-201ENST00000436316 395 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 UBE2D3P1-201ENST00000436669 444 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 PCBP2P1-201ENST00000437262 977 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 FGF7P5-201ENST00000441829 291 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC023141.9-201ENST00000458734 412 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 RPL5P24-201ENST00000463742 885 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC082651.2-201ENST00000496833 166 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 DYNLL1P6-201ENST00000503440 264 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 MTND1P22-201ENST00000510572 951 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 RNU6-1129P-201ENST00000515964 104 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC135279.1-201ENST00000543493 504 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 MIR4776-2-201ENST00000580204 80 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 Z99497.2-201ENST00000603634 310 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC009220.3-201ENST00000604318 586 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC005252.1-201ENST00000604518 1063 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AP004247.3-201ENST00000608682 624 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AL450489.1-201ENST00000612071 468 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 RNA5SP440-201ENST00000612665 119 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AL031658.2-201ENST00000616850 651 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC234782.5-201ENST00000617723 324 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 AC005840.5-201ENST00000619166 599 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 GTF2IP4-201ENST00000453092 2054 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms