Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00474Q9P2X8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00474Q9P2X8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AL133412.1-201ENST00000380194 2992 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 U8.4-201ENST00000363626 134 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 SNORA74A-201ENST00000364089 198 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 RNA5SP455-201ENST00000365190 119 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AL645733.1-201ENST00000402250 217 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 LAP3P1-201ENST00000403648 294 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 DPPA2P3-201ENST00000411853 655 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC114755.2-201ENST00000413520 361 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC009237.10-201ENST00000414112 510 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AL357520.1-201ENST00000441557 453 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 IGHV5-78-201ENST00000450948 295 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC133473.1-201ENST00000455173 299 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 RPS6P4-201ENST00000494693 758 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 RNU6-964P-201ENST00000516524 69 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 RPL23AP53-201ENST00000521854 457 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 CD24P2-201ENST00000565486 219 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 MIR4646-201ENST00000580775 63 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC012414.7-202ENST00000622705 1090 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC015908.5-201ENST00000623289 343 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC011815.3-201ENST00000624194 473 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 ASNSP1-201ENST00000518311 1939 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 AC099654.2-201ENST00000433031 1980 ntBASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.18□□□□□ -1.9
LINC00474Q9P2X8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 MTND5P23-201ENST00000430812 1655 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 AC112255.1-201ENST00000624070 2493 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 USP9YP4-201ENST00000424401 1745 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 RPL23AP48-201ENST00000406913 488 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 SPTLC1P2-201ENST00000407089 121 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 RN7SKP273-201ENST00000411392 314 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 AL160275.2-201ENST00000412010 394 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 GJA6P-201ENST00000415117 1042 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 AC069285.2-201ENST00000440210 275 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 AC005532.2-201ENST00000467154 373 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 RN7SL799P-201ENST00000475891 298 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 RPL7AP6-201ENST00000477943 801 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 AC090114.3-201ENST00000479267 829 ntBASIC3.17□□□□□ -1.9
LINC00474Q9P2X8 OR2A3P-201ENST00000493774 953 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms