Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL136981.2-201ENST00000617319 734 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC016717.3-201ENST00000624730 554 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC087565.3-203ENST00000641018 837 ntBASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SEC61A2Q9H9S3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC110373.1-201ENST00000505994 3505 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 OR10J6P-201ENST00000289731 930 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 SUGT1P2-201ENST00000379452 992 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 USP9YP31-201ENST00000431405 881 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC112492.2-201ENST00000432774 1030 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 DEFA9P-201ENST00000433042 285 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC008072.1-201ENST00000434254 824 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC093155.1-201ENST00000440164 826 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 RN7SL552P-201ENST00000462094 276 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 RPS27P20-201ENST00000492051 246 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 MYL12BP2-201ENST00000503948 512 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC113367.2-201ENST00000505749 160 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 ARL2BPP4-201ENST00000506854 471 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 ZNF519P4-201ENST00000514008 125 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 SNORA74.1-201ENST00000516320 180 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 RNA5SP473-201ENST00000516402 125 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 TPRKBP2-201ENST00000565969 475 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 BNIP3P33-201ENST00000598912 569 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 EIF1P6-201ENST00000600054 334 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC015871.2-201ENST00000603605 948 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC010857.1-201ENST00000606398 594 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC004067.1-201ENST00000608733 700 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AL135999.3-201ENST00000610501 812 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 MIR6721-201ENST00000617181 87 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 MIR6811-201ENST00000620409 58 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC012414.7-202ENST00000622705 1090 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AL353743.4-201ENST00000422653 1547 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 WDR95P-201ENST00000425638 1542 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AC003985.2-201ENST00000562268 1669 ntBASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SEC61A2Q9H9S3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms