Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AL359922.2-201ENST00000581788 3017 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC117470.1-201ENST00000381974 330 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 Y_RNA.557-201ENST00000384680 107 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 SNORA17A-201ENST00000391185 133 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 H2AFZP3-201ENST00000394213 387 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 RNU2-8P-201ENST00000410727 190 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 RPLP1P10-201ENST00000413972 339 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AL590806.1-201ENST00000415818 853 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 RPL34P3-201ENST00000421454 338 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 MTCYBP10-201ENST00000424905 650 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 GAPDHP59-201ENST00000435908 267 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AL136454.1-201ENST00000443181 466 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AL137792.2-201ENST00000443484 235 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 TCEA1P1-201ENST00000449716 880 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 GAPDHP53-201ENST00000458397 924 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 RN7SL492P-201ENST00000460700 295 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC083798.1-201ENST00000472671 131 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 HMGN2P25-201ENST00000486956 268 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC073610.1-201ENST00000489971 396 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 RPS23P1-201ENST00000491662 432 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 KCTD9P2-201ENST00000512203 1013 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 RPL10P19-201ENST00000519013 301 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 IGKV3D-31-201ENST00000519131 281 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AP002404.1-201ENST00000532005 451 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AL163153.1-201ENST00000554223 283 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC011816.2-201ENST00000607089 556 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AL096712.1-201ENST00000614561 159 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 MRPL57P3-201ENST00000619218 176 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 RN7SL680P-201ENST00000620379 299 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC087894.3-201ENST00000623682 349 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC005858.3-201ENST00000624756 589 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 SNORA17.5-201ENST00000630429 132 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 AC011471.4-201ENST00000638271 216 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 GDI2P1-201ENST00000429312 1336 ntBASIC6.9□□□□□ -1.3
CNTNAP3Q9BZ76 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CNTNAP3Q9BZ76 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CNTNAP3Q9BZ76 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CNTNAP3Q9BZ76 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC6.9□□□□□ -1.31
CNTNAP3Q9BZ76 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.9□□□□□ -1.31
CNTNAP3Q9BZ76 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CNTNAP3Q9BZ76 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CNTNAP3Q9BZ76 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CNTNAP3Q9BZ76 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC6.9□□□□□ -1.31
CNTNAP3Q9BZ76 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 AC009166.2-201ENST00000624410 2833 ntBASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNTNAP3Q9BZ76 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms