Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 OR5M5P-201ENST00000529703 936 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC103681.1-201ENST00000531663 423 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC100770.1-201ENST00000532310 322 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL41P2-201ENST00000544920 409 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC137055.1-201ENST00000549333 395 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC079363.1-201ENST00000551366 1125 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TRAV33-201ENST00000557514 338 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 PIGHP1-201ENST00000558833 565 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC073176.1-202ENST00000558852 409 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 HMGN2P47-201ENST00000559378 272 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC023300.1-201ENST00000562561 382 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AOC4P-204ENST00000569586 565 ntTSL 4 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL023803.1-201ENST00000570096 187 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC144NL-AS1-214ENST00000581958 1188 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR4663-201ENST00000582039 76 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SNHG15-209ENST00000584686 541 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC020905.1-201ENST00000587777 575 ntTSL 4 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TMEM147-AS1-204ENST00000590125 698 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC020914.5-201ENST00000595339 329 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 KLK13-205ENST00000595547 615 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GMFG-204ENST00000595636 487 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC005176.2-201ENST00000596933 147 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC067969.2-201ENST00000597015 570 ntTSL 4 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 Z93241.1-201ENST00000602478 664 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 NDUFB1-206ENST00000605997 336 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL136097.3-201ENST00000611097 505 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ABCC8-220ENST00000612903 183 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR1273H-201ENST00000612921 116 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 Metazoa_SRP.72-201ENST00000617458 278 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 BSNDP2-201ENST00000621945 366 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL513327.1-208ENST00000624012 1047 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL031719.2-201ENST00000624488 476 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC092902.2-220ENST00000626334 685 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ZRANB2-AS2-224ENST00000626344 400 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 VIPR1-AS1-229ENST00000628282 515 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR6511B2-201ENST00000636908 71 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CLDN1-201ENST00000295522 3481 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ATP1A3-209ENST00000602133 3458 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 COPG2-202ENST00000425248 3134 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 WDR36-204ENST00000513710 3140 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 POLR1A-203ENST00000409681 6454 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 WDR93-201ENST00000268130 2409 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF823-201ENST00000341191 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC241584.2-201ENST00000637142 2090 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 NLRP12-203ENST00000391772 3205 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 NFIA-203ENST00000371185 1714 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 IQSEC2-201ENST00000375365 4004 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL035681.1-201ENST00000441316 2500 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC29A3-201ENST00000373189 2257 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC084879.1-202ENST00000636927 2284 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TRPC2-201ENST00000451043 3173 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC114980.1-201ENST00000505668 3157 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF827-208ENST00000513320 3165 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SCMH1-207ENST00000372597 3252 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 DNAJC5G-201ENST00000296097 2008 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 OPTN-206ENST00000378764 2498 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC087203.2-201ENST00000526502 1587 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ZSCAN30-205ENST00000589178 3368 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ZP4-202ENST00000611898 2474 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CAPZA1-201ENST00000263168 3020 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MX2-201ENST00000330714 3042 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC02487-201ENST00000400831 2557 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 YPEL4-203ENST00000524669 4000 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms