Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RN7SKP106-201ENST00000410832 272 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 P2RY10P2-201ENST00000416730 913 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 RPL10P17-201ENST00000453852 316 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 AC026979.1-201ENST00000492525 396 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 AK3P4-201ENST00000504283 583 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 RNA5SP249-201ENST00000516127 99 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 GTF2IP11-201ENST00000526931 420 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 AC009643.1-201ENST00000532030 391 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 AL390334.1-201ENST00000556395 450 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 AP005119.2-201ENST00000579735 1105 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 MIR4715-201ENST00000584117 79 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 AC022726.1-201ENST00000587475 207 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 AC020915.5-201ENST00000596836 964 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.78□□□□□ -1.48
RPAP1Q9BWH6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
RPAP1Q9BWH6 CASC19-206ENST00000641028 1430 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AC007382.1-201ENST00000624376 2618 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AC125257.1-201ENST00000560400 2930 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 RPL32P3-201ENST00000359025 275 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 RNA5SP397-201ENST00000391323 118 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AC012519.1-201ENST00000424588 610 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 RPL23AP1-201ENST00000428990 471 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AL451139.1-201ENST00000434718 346 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 CEACAMP6-201ENST00000452007 574 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AC114982.2-201ENST00000461396 358 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AC104971.1-201ENST00000495117 578 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 RNU6-709P-201ENST00000517257 104 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 MIR5699-201ENST00000578903 90 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 SS18L2P2-201ENST00000583960 235 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 RNF138P2-201ENST00000603490 592 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 FAM27B-201ENST00000610601 213 ntBASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RPAP1Q9BWH6 SOCS5P3-201ENST00000425115 1576 ntBASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 AC097461.1-201ENST00000568928 2821 ntBASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 RPS17P8-201ENST00000434525 335 ntBASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 EIF2S2P2-201ENST00000447161 982 ntBASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 RNU2-30P-201ENST00000516209 141 ntBASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 RNU1-6P-201ENST00000516290 144 ntBASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 RN7SKP92-201ENST00000517266 244 ntBASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 AC007066.2-202ENST00000566531 914 ntBASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 TLK1P1-201ENST00000456760 2440 ntBASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RPAP1Q9BWH6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.75□□□□□ -1.49
RPAP1Q9BWH6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RPAP1Q9BWH6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RPAP1Q9BWH6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPAP1Q9BWH6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RPAP1Q9BWH6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPAP1Q9BWH6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms