Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.23□□□□□ -1.41
NUP88Q99567 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.23□□□□□ -1.41
NUP88Q99567 AC090527.3-201ENST00000619041 548 ntBASIC6.23□□□□□ -1.41
NUP88Q99567 AC073569.3-201ENST00000619055 682 ntBASIC6.23□□□□□ -1.41
NUP88Q99567 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
NUP88Q99567 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NUP88Q99567 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NUP88Q99567 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.23□□□□□ -1.41
NUP88Q99567 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NUP88Q99567 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.23□□□□□ -1.41
NUP88Q99567 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
NUP88Q99567 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NUP88Q99567 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NUP88Q99567 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NUP88Q99567 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP88Q99567 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.22□□□□□ -1.41
NUP88Q99567 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
NUP88Q99567 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUP88Q99567 AC053481.2-202ENST00000582394 1500 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 RNA5SP27-201ENST00000363839 119 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP88Q99567 MIR105-1-201ENST00000385222 81 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP88Q99567 AL133482.1-201ENST00000415988 498 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP88Q99567 MRPS21P2-201ENST00000424704 264 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 AC093655.2-201ENST00000425735 631 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 AL359265.1-201ENST00000440296 795 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 AL031313.1-201ENST00000448435 256 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP88Q99567 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.22□□□□□ -1.41
NUP88Q99567 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.22□□□□□ -1.41
NUP88Q99567 AC009127.1-201ENST00000467090 155 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.22□□□□□ -1.41
NUP88Q99567 SNRPCP2-201ENST00000504370 475 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP88Q99567 AC021106.1-201ENST00000509020 1058 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP88Q99567 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP88Q99567 YWHABP2-201ENST00000540201 713 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 HMGN2P47-201ENST00000559378 272 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 SS18L2P2-201ENST00000583960 235 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP88Q99567 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP88Q99567 AC008536.1-201ENST00000602872 669 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 RPP40P2-201ENST00000603596 712 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 TAS2R6P-201ENST00000605022 826 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 AC133644.2-201ENST00000608142 540 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 AC011472.4-201ENST00000615848 491 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUP88Q99567 AC074101.1-201ENST00000637861 241 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 LINC01739-205ENST00000641890 573 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NUP88Q99567 AC006206.1-201ENST00000544842 3387 ntBASIC6.22□□□□□ -1.41
NUP88Q99567 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP88Q99567 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
NUP88Q99567 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.21□□□□□ -1.41
NUP88Q99567 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
NUP88Q99567 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
NUP88Q99567 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
NUP88Q99567 AP001029.2-203ENST00000589795 4910 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUP88Q99567 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUP88Q99567 SNORD56.6-201ENST00000384569 71 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 U3.28-201ENST00000391249 210 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 DBIP1-201ENST00000401435 260 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 RPL7P27-201ENST00000403775 720 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 RN7SKP126-201ENST00000411143 300 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 AL445213.1-201ENST00000412589 747 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.21□□□□□ -1.42
NUP88Q99567 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.21□□□□□ -1.42
NUP88Q99567 RPS4XP16-201ENST00000427198 791 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 RPL12P17-201ENST00000432393 498 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 HSFY3P-201ENST00000444242 1191 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 LINC02210-201ENST00000444561 288 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.21□□□□□ -1.42
NUP88Q99567 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.21□□□□□ -1.42
NUP88Q99567 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.21□□□□□ -1.42
NUP88Q99567 AC090114.3-201ENST00000479267 829 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.21□□□□□ -1.42
NUP88Q99567 RPS4XP20-201ENST00000505751 772 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.21□□□□□ -1.42
NUP88Q99567 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.21□□□□□ -1.42
NUP88Q99567 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.21□□□□□ -1.42
NUP88Q99567 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.21□□□□□ -1.42
NUP88Q99567 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
NUP88Q99567 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.21□□□□□ -1.42
NUP88Q99567 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUP88Q99567 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.21□□□□□ -1.42
NUP88Q99567 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUP88Q99567 AC006116.5-201ENST00000591936 559 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.21□□□□□ -1.42
NUP88Q99567 AC068870.2-201ENST00000620635 389 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 AL356863.1-201ENST00000623378 1080 ntBASIC6.21□□□□□ -1.42
NUP88Q99567 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.21□□□□□ -1.42
NUP88Q99567 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.21□□□□□ -1.42
NUP88Q99567 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NUP88Q99567 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.21□□□□□ -1.42
NUP88Q99567 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms