Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC138627.1-204ENST00000641894 765 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC120338.1-201ENST00000625074 1541 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC131971.1-201ENST00000332881 1482 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL21A1Q96P44 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL21A1Q96P44 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC008758.3-201ENST00000507003 1829 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 MAPK10-286ENST00000641208 8747 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 IL6STP1-201ENST00000346911 1020 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 SNORA58B-201ENST00000364259 136 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 RN7SKP216-201ENST00000411050 312 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 TBCAP2-201ENST00000416175 326 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 VN1R54P-201ENST00000435210 1049 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 PSMD10P3-201ENST00000437000 448 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC112498.1-201ENST00000444401 332 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 Z80107.2-201ENST00000445127 392 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC000111.2-201ENST00000448200 210 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 NDUFB5P1-201ENST00000508134 564 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC021146.3-201ENST00000511911 260 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC092593.2-201ENST00000513866 913 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC008033.2-201ENST00000542626 177 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 MTND2P17-201ENST00000550281 688 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 SNORA74C-1-201ENST00000580726 201 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC133644.2-201ENST00000608142 540 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 uc_338.18-201ENST00000615451 175 ntBASIC4.53□□□□□ -1.68
COL21A1Q96P44 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
COL21A1Q96P44 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL21A1Q96P44 AC005332.5-201ENST00000591222 2919 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL21A1Q96P44 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL21A1Q96P44 AC108751.5-201ENST00000492880 1336 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL21A1Q96P44 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL21A1Q96P44 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL21A1Q96P44 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL21A1Q96P44 RNU1-83P-201ENST00000363426 164 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 U3.35-201ENST00000408405 208 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 GTF2IP5-201ENST00000414608 731 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 RPL12P43-201ENST00000420608 499 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 OR2AM1P-201ENST00000422137 422 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 RPS27P18-201ENST00000431701 247 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 SLC25A18P1-201ENST00000449385 454 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 DEFB109F-201ENST00000491870 277 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 RNU4-18P-201ENST00000516751 149 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 RNU6-709P-201ENST00000517257 104 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.52□□□□□ -1.69
COL21A1Q96P44 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL21A1Q96P44 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL21A1Q96P44 OR51H2P-202ENST00000641424 3046 ntBASIC4.52□□□□□ -1.69
COL21A1Q96P44 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL21A1Q96P44 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms