Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS50Q96JG6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS50Q96JG6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC117409.1-201ENST00000470499 1310 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 TRIM51GP-201ENST00000534741 1350 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC025574.1-201ENST00000554784 1653 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 GAPDHP24-201ENST00000328713 983 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 RNA5SP242-201ENST00000364171 118 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 OR3A2-201ENST00000408891 1076 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 RN7SKP29-201ENST00000410957 272 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AL354890.1-201ENST00000413730 346 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AL133482.1-201ENST00000415988 498 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 BMS1P17-202ENST00000416720 316 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 EIF4A1P1-201ENST00000420241 934 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 RNGTTP1-201ENST00000420965 728 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 OR10T1P-201ENST00000424327 947 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 RPL12P28-201ENST00000430852 489 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC004129.2-201ENST00000457229 287 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 PSMC1P13-201ENST00000458195 985 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 SCARNA6.1-201ENST00000516989 238 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 HMGB1P42-201ENST00000532126 553 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC127381.1-201ENST00000555979 939 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC015802.2-201ENST00000589690 189 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 ZNF849P-201ENST00000594711 1566 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 VN1R87P-201ENST00000596706 487 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC113368.1-201ENST00000603736 382 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC097478.2-201ENST00000610572 514 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC009039.2-201ENST00000624524 529 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VPS50Q96JG6 STX3-208ENST00000641815 3236 ntBASIC5.44□□□□□ -1.54
VPS50Q96JG6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS50Q96JG6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS50Q96JG6 VPS35P1-201ENST00000563400 1518 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS50Q96JG6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS50Q96JG6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS50Q96JG6 RNA5SP500-201ENST00000364486 119 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS50Q96JG6 RNU1-136P-201ENST00000384181 164 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 MIR513B-201ENST00000385136 84 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 HMGB1P20-201ENST00000402555 677 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AC233289.1-201ENST00000403700 508 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 OR2X1P-201ENST00000421144 687 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 TNPO1P1-201ENST00000423641 1138 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 VN1R21P-201ENST00000426703 765 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms