Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC022404.1-201ENST00000555320 273 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC015720.2-201ENST00000567709 334 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTP4A1Q93096 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AL596275.2-204ENST00000641628 552 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 AL596275.2-206ENST00000641957 626 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC134882.1-201ENST00000603738 1676 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 AL022393.1-201ENST00000625142 1677 ntBASIC4.76□□□□□ -1.65
PTP4A1Q93096 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTP4A1Q93096 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTP4A1Q93096 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.76□□□□□ -1.65
PTP4A1Q93096 AC007529.1-201ENST00000418574 2178 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 Z73965.1-201ENST00000623412 2297 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 SNORA17A-201ENST00000391185 133 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 AL353692.2-201ENST00000407054 335 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 TCEA1P4-201ENST00000415066 844 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC234782.4-201ENST00000417646 1048 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 MARK2P12-201ENST00000420129 585 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 BX119904.1-201ENST00000432026 348 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 AL389925.1-201ENST00000432257 728 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 GSTM5P1-201ENST00000434751 660 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC108161.1-201ENST00000461060 402 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 NPM1P17-201ENST00000479221 602 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 RN7SL273P-201ENST00000481561 299 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC090638.1-201ENST00000498296 909 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 ARL4AP1-201ENST00000503220 705 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 RN7SKP99-201ENST00000517028 307 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC090819.1-201ENST00000523800 1111 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 HMGB3P26-201ENST00000560051 582 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 MIR4310-201ENST00000582950 57 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 RN7SL435P-201ENST00000584418 282 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 SNORA17.5-201ENST00000630429 132 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 AC023421.1-201ENST00000590535 1785 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PTP4A1Q93096 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 OR51H2P-202ENST00000641424 3046 ntBASIC4.75□□□□□ -1.65
PTP4A1Q93096 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTP4A1Q93096 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTP4A1Q93096 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTP4A1Q93096 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTP4A1Q93096 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.74□□□□□ -1.65
PTP4A1Q93096 AC022031.1-201ENST00000585985 2593 ntBASIC4.74□□□□□ -1.65
PTP4A1Q93096 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTP4A1Q93096 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTP4A1Q93096 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PTP4A1Q93096 OR52E6-202ENST00000379946 954 ntBASIC4.74□□□□□ -1.65
PTP4A1Q93096 MIR589-201ENST00000385238 99 ntBASIC4.74□□□□□ -1.65
PTP4A1Q93096 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.74□□□□□ -1.65
PTP4A1Q93096 Z93019.1-201ENST00000416450 973 ntBASIC4.74□□□□□ -1.65
PTP4A1Q93096 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.74□□□□□ -1.65
PTP4A1Q93096 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.74□□□□□ -1.65
PTP4A1Q93096 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms