Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC004980.4-201ENST00000513375 203 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 NDUFB4P12-201ENST00000513465 390 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 RNA5SP464-201ENST00000516251 108 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC234775.3-201ENST00000564612 656 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC093249.4-201ENST00000564755 259 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 OR1F2P-201ENST00000570470 933 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC011447.4-201ENST00000587562 111 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC233280.2-201ENST00000603917 1070 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC093799.2-201ENST00000610062 578 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC243960.7-201ENST00000623532 707 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC004808.2-201ENST00000627965 773 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AL596275.2-204ENST00000641628 552 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AL596275.2-206ENST00000641957 626 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 OR10J6P-201ENST00000289731 930 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 RNU6-984P-201ENST00000363236 109 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AL021331.1-201ENST00000402817 582 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 U3.35-201ENST00000408405 208 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 EIF4A1P1-201ENST00000420241 934 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AL031584.1-201ENST00000447169 754 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AL162388.1-201ENST00000450912 352 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC112206.1-201ENST00000468416 477 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 RN7SL97P-201ENST00000486780 299 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC008953.1-201ENST00000497334 318 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC138938.1-201ENST00000515431 782 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 RNA5SP92-201ENST00000516437 110 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC090819.1-201ENST00000523800 1111 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC109635.6-201ENST00000525487 1113 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 AC022467.1-201ENST00000614738 749 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 PHKBP1-201ENST00000450951 1951 ntBASIC4.62□□□□□ -1.67
CLHC1Q8NHS4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 RN7SKP273-201ENST00000411392 314 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AC005033.1-201ENST00000428904 813 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 OR2AF1P-201ENST00000454899 889 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 RPS26P39-201ENST00000469206 341 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 RN7SL214P-201ENST00000487317 265 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 RN7SL558P-201ENST00000497468 299 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 RN7SKP46-201ENST00000515942 234 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 VTA1P2-201ENST00000520205 911 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AC090515.3-201ENST00000560431 315 ntBASIC4.61□□□□□ -1.67
CLHC1Q8NHS4 AC007225.2-201ENST00000562529 256 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms