Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL136164.3-201ENST00000624429 3978 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC099654.2-201ENST00000433031 1980 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 RNU1-20P-201ENST00000363314 162 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 RNU6-1331P-201ENST00000363658 106 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 VDAC1P9-201ENST00000412766 841 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 GJA6P-201ENST00000415117 1042 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AL451139.1-201ENST00000434718 346 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 BX284632.1-201ENST00000478218 541 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 RPL7AP10-201ENST00000481016 791 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 RN7SL558P-201ENST00000497468 299 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 RN7SKP66-201ENST00000516681 231 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC008126.1-201ENST00000549019 480 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC018552.1-201ENST00000562099 811 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AP005212.4-201ENST00000614206 710 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC234782.5-201ENST00000617723 324 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 MIR6826-201ENST00000617808 98 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 IRF5P1-201ENST00000504852 2164 ntBASIC5.04□□□□□ -1.6
CCDC50Q8IVM0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 C4BPAP1-201ENST00000415474 1893 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 SNORA51.1-201ENST00000363243 140 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 RNU1-106P-201ENST00000384382 164 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 SNORA70-201ENST00000384436 135 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 RNA5SP345-201ENST00000410646 108 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 RPS27P18-201ENST00000431701 247 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 PPIAP13-201ENST00000434706 478 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 RPL5P30-201ENST00000465511 891 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 RNA5SP392-201ENST00000516905 112 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 AC025423.2-201ENST00000537570 439 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 AC010424.2-201ENST00000607594 443 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 AC009163.6-201ENST00000612367 342 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 MIR6862-1-201ENST00000613016 70 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 EIF3FP1-201ENST00000613970 806 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 MIR6862-2-201ENST00000614755 70 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 AC006453.5-201ENST00000636451 619 ntBASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC50Q8IVM0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AL080315.1-201ENST00000406055 466 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 GTF3AP1-201ENST00000416942 1004 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AC005033.1-201ENST00000428904 813 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 RPS17P8-201ENST00000434525 335 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 RAB9AP5-201ENST00000437794 597 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 RAB9AP2-201ENST00000443911 597 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 OR9N1P-201ENST00000491296 333 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AGGF1P3-201ENST00000493675 1213 ntBASIC5.02□□□□□ -1.61
CCDC50Q8IVM0 AC140172.1-201ENST00000502928 141 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms