Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 Z74021.1-201ENST00000423610 407 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 UBE2V2P1-201ENST00000434717 398 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 OR52B5P-201ENST00000435337 951 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 PRPF38AP2-201ENST00000438179 851 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AL163193.1-201ENST00000444895 788 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 MTND6P32-201ENST00000457611 483 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AC022795.1-201ENST00000473808 480 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 RPL23AP65-201ENST00000475608 468 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 RN7SL222P-201ENST00000476452 299 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 STMN1P2-201ENST00000508435 439 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 CCNHP1-201ENST00000513311 678 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 SNORD95-201ENST00000579879 68 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 SLC25A36P1-201ENST00000590111 465 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AC133552.5-201ENST00000604266 540 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 OR52B5P-202ENST00000641118 1110 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 RNA5SP242-201ENST00000364171 118 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 RNA5SP132-201ENST00000364725 118 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 RNA5SP455-201ENST00000365190 119 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 RNA5SP146-201ENST00000410743 123 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 HMGB3P10-201ENST00000434734 572 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AL645937.3-201ENST00000453647 936 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AC023141.9-201ENST00000458734 412 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 RNA5SP392-201ENST00000516905 112 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 IGLVIV-64-201ENST00000518581 301 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 MIR4310-201ENST00000582950 57 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AL133406.3-201ENST00000606817 541 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AC091979.2-201ENST00000607514 214 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AC126915.2-201ENST00000610957 190 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AL627230.1-201ENST00000613077 211 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AL591926.8-201ENST00000616876 211 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 OR51C1P-202ENST00000641159 1444 ntBASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.69□□□□□ -1.66
NUDCD3Q8IVD9 AL355852.1-201ENST00000454081 1771 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 SNURFL-201ENST00000309296 343 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 RNA5SP435-201ENST00000364044 108 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 LINC00993-201ENST00000420453 540 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 CFL1P1-202ENST00000432948 411 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AL389915.2-201ENST00000454576 441 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 RPL23AP56-201ENST00000460778 453 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 ATP5G1P3-201ENST00000463301 410 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 OR2AO1P-201ENST00000476497 403 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 RN7SL214P-201ENST00000487317 265 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AC108022.1-201ENST00000493466 478 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AC113430.1-201ENST00000506872 718 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms