Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MIR6826-201ENST00000617808 98 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AL445493.3-201ENST00000619568 477 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 CCT8P1-201ENST00000413611 1657 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 CIR1P2-201ENST00000514821 1342 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 RAD1P1-201ENST00000231383 813 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 RNU1-149P-201ENST00000390870 161 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AP000534.2-201ENST00000412729 568 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 RPL34P26-201ENST00000445636 354 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 RPS26P41-201ENST00000450370 284 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AL035090.1-201ENST00000454835 332 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC079168.1-201ENST00000458741 345 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 RN7SL30P-201ENST00000488416 306 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 RPL23AP73-201ENST00000492507 471 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC004825.1-201ENST00000555068 586 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 MIR4489-201ENST00000578869 62 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC108738.1-201ENST00000603703 237 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 SUMO2P15-201ENST00000604285 278 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC090525.3-201ENST00000605601 189 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AL158211.2-201ENST00000607282 395 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AL512329.2-201ENST00000607350 548 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC017076.1-201ENST00000607613 578 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AP000894.4-201ENST00000610185 483 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AL133445.2-201ENST00000611191 527 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC243654.2-201ENST00000612843 443 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC008115.4-201ENST00000619780 775 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AP003400.6-201ENST00000624698 740 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 OR55B1P-203ENST00000641518 2602 ntBASIC4.91□□□□□ -1.62
NUP54Q7Z3B4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 AC002525.1-201ENST00000624392 1622 ntBASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.9□□□□□ -1.62
NUP54Q7Z3B4 RN7SKP153-201ENST00000365026 316 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 OR4K12P-201ENST00000406538 961 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 MARK2P12-201ENST00000420129 585 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AL031663.1-201ENST00000437445 219 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 RPL7P6-201ENST00000480903 738 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AC058823.1-201ENST00000485315 474 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 AL049874.2-201ENST00000492636 288 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 HMGN1P9-201ENST00000515212 298 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 RNA5SP230-201ENST00000517039 122 ntBASIC4.9□□□□□ -1.63
NUP54Q7Z3B4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms