Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 ARL4AP5-201ENST00000404372 599 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AL591848.1-201ENST00000413092 322 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC069213.2-201ENST00000420238 366 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 EIF2S2P3-201ENST00000428356 999 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 SDR42E1P3-201ENST00000438345 502 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 H2AFZP5-201ENST00000446960 382 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 OR52A4P-201ENST00000472867 958 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC073358.1-201ENST00000505671 684 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 C1GALT1P3-201ENST00000522049 819 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC090079.2-201ENST00000575289 768 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC022387.2-201ENST00000604050 448 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 MIR6798-201ENST00000612887 67 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC012414.7-202ENST00000622705 1090 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 AC080188.3-201ENST00000624842 748 ntBASIC5.74□□□□□ -1.49
PDS5AQ29RF7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 AL450345.1-202ENST00000605741 3881 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 OR56B2P-202ENST00000641377 2453 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 AC100778.3-201ENST00000580060 1750 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 Z98755.1-201ENST00000407015 1384 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 AL034370.1-201ENST00000397254 1590 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 TMBIM7P-201ENST00000418074 855 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 GNG5P5-201ENST00000420444 220 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 RPL23AP1-201ENST00000428990 471 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 CNOT7P1-201ENST00000429006 852 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 RN7SL354P-201ENST00000469282 294 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 LSM3P2-201ENST00000551246 273 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 ADAD1P2-201ENST00000588476 646 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.73□□□□□ -1.49
PDS5AQ29RF7 AL163152.1-201ENST00000642001 374 ntBASIC5.73□□□□□ -1.49
PDS5AQ29RF7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 KARSP3-201ENST00000571212 1504 ntBASIC5.72□□□□□ -1.49
PDS5AQ29RF7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 RNU1-82P-201ENST00000390851 165 ntBASIC5.72□□□□□ -1.49
PDS5AQ29RF7 ELOCP19-201ENST00000411919 318 ntBASIC5.72□□□□□ -1.49
PDS5AQ29RF7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 AC013470.3-201ENST00000420252 1194 ntBASIC5.72□□□□□ -1.49
PDS5AQ29RF7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 AC106901.1-201ENST00000425086 698 ntBASIC5.72□□□□□ -1.49
PDS5AQ29RF7 RPS6P14-201ENST00000425165 719 ntBASIC5.72□□□□□ -1.49
PDS5AQ29RF7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.72□□□□□ -1.49
PDS5AQ29RF7 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 RAB9BP1-201ENST00000519581 626 ntBASIC5.72□□□□□ -1.49
PDS5AQ29RF7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 RN7SL652P-201ENST00000577769 300 ntBASIC5.72□□□□□ -1.49
PDS5AQ29RF7 AP002371.2-201ENST00000624450 503 ntBASIC5.72□□□□□ -1.49
PDS5AQ29RF7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDS5AQ29RF7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PDS5AQ29RF7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PDS5AQ29RF7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PDS5AQ29RF7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
PDS5AQ29RF7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.71□□□□□ -1.5
PDS5AQ29RF7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDS5AQ29RF7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms