Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.52□□□□□ -1.53
GABPAQ06546 AC010547.7-201ENST00000570323 333 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 LSM1P2-201ENST00000604911 322 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 AC096586.2-201ENST00000610260 441 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.52□□□□□ -1.53
GABPAQ06546 AC002044.3-201ENST00000623314 541 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 U3.53-201ENST00000628922 216 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 AC139713.2-214ENST00000642059 1811 ntBASIC5.52□□□□□ -1.53
GABPAQ06546 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
GABPAQ06546 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GABPAQ06546 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
GABPAQ06546 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GABPAQ06546 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.52□□□□□ -1.53
GABPAQ06546 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.51□□□□□ -1.53
GABPAQ06546 DDX18P5-201ENST00000534547 1306 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
GABPAQ06546 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GABPAQ06546 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.51□□□□□ -1.53
GABPAQ06546 ZNF137P-201ENST00000456718 1920 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
GABPAQ06546 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GABPAQ06546 RNA5SP187-201ENST00000384400 119 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.51□□□□□ -1.53
GABPAQ06546 UQCRBP1-201ENST00000421129 336 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 REREP1Y-201ENST00000422655 198 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 AC009480.2-201ENST00000422916 432 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 REREP2Y-201ENST00000439103 200 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 ARL2BPP10-201ENST00000446487 531 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 AC012512.1-201ENST00000446594 718 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 RPL7AP10-201ENST00000481016 791 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 AC025164.1-201ENST00000496249 478 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 RPS26P24-201ENST00000497656 331 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.51□□□□□ -1.53
GABPAQ06546 AC108043.1-201ENST00000512696 574 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.51□□□□□ -1.53
GABPAQ06546 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.51□□□□□ -1.53
GABPAQ06546 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.51□□□□□ -1.53
GABPAQ06546 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.51□□□□□ -1.53
GABPAQ06546 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.51□□□□□ -1.53
GABPAQ06546 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.51□□□□□ -1.53
GABPAQ06546 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.51□□□□□ -1.53
GABPAQ06546 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.51□□□□□ -1.53
GABPAQ06546 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
GABPAQ06546 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GABPAQ06546 AC100778.3-201ENST00000580060 1750 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 AP000542.2-201ENST00000623199 6179 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 MAPK10-328ENST00000641553 4009 ntBASIC5.51□□□□□ -1.53
GABPAQ06546 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
GABPAQ06546 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GABPAQ06546 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GABPAQ06546 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GABPAQ06546 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.5□□□□□ -1.53
GABPAQ06546 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.5□□□□□ -1.53
GABPAQ06546 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
GABPAQ06546 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
GABPAQ06546 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
GABPAQ06546 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.5□□□□□ -1.53
GABPAQ06546 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.5□□□□□ -1.53
GABPAQ06546 FAM3C2-201ENST00000312214 681 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 MIR659-201ENST00000384963 97 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 AC004690.1-201ENST00000418216 328 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 EIF4HP2-201ENST00000424380 563 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.5□□□□□ -1.53
GABPAQ06546 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.5□□□□□ -1.53
GABPAQ06546 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.5□□□□□ -1.53
GABPAQ06546 AL162591.2-201ENST00000449634 317 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 FCF1P7-201ENST00000451185 558 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 SCARNA10-201ENST00000459255 330 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 AC090142.1-201ENST00000465776 462 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 DEFB109A-201ENST00000482450 265 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.5□□□□□ -1.53
GABPAQ06546 HPRT1P1-201ENST00000509498 657 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 AC026782.2-201ENST00000510845 636 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 AC025423.2-201ENST00000537570 439 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.5□□□□□ -1.53
GABPAQ06546 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.5□□□□□ -1.53
GABPAQ06546 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.5□□□□□ -1.53
GABPAQ06546 CYCSP40-201ENST00000575927 294 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 MIR4284-201ENST00000578924 81 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 MIR4660-201ENST00000583549 74 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 OR8G7P-201ENST00000616658 848 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 AL049536.1-201ENST00000625043 744 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
GABPAQ06546 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GABPAQ06546 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
GABPAQ06546 AC073136.1-201ENST00000449426 2884 ntBASIC5.5□□□□□ -1.53
GABPAQ06546 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GABPAQ06546 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.5□□□□□ -1.53
GABPAQ06546 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.5□□□□□ -1.53
GABPAQ06546 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GABPAQ06546 AC135352.1-201ENST00000506173 1418 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.49□□□□□ -1.53
GABPAQ06546 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.49□□□□□ -1.53
GABPAQ06546 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.49□□□□□ -1.53
GABPAQ06546 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
GABPAQ06546 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GABPAQ06546 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GABPAQ06546 RAD17P1-201ENST00000418130 2042 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 E2F6P2-201ENST00000420708 748 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms