Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC008072.1-201ENST00000434254 824 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 NMNAT1P2-201ENST00000435192 860 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AC004938.1-201ENST00000438468 308 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3AP84243 AC010733.1-201ENST00000451515 401 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AC091685.2-201ENST00000454924 864 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 CYCSP34-201ENST00000458172 304 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AC112206.1-201ENST00000468416 477 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.26□□□□□ -1.73
H3F3AP84243 AC091868.1-201ENST00000508746 304 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 IGKV1-32-201ENST00000519290 311 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.26□□□□□ -1.73
H3F3AP84243 AC018442.3-201ENST00000523025 183 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AP001880.2-201ENST00000538233 448 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3AP84243 AC087477.6-201ENST00000559595 843 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AC084759.1-201ENST00000561168 290 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 UBE2FP2-201ENST00000566646 462 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AC010547.7-201ENST00000570323 333 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 MIR4675-201ENST00000577898 77 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3AP84243 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.26□□□□□ -1.73
H3F3AP84243 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.26□□□□□ -1.73
H3F3AP84243 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
H3F3AP84243 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3AP84243 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3AP84243 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.26□□□□□ -1.73
H3F3AP84243 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
H3F3AP84243 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3AP84243 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
H3F3AP84243 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.26□□□□□ -1.73
H3F3AP84243 Z95327.2-201ENST00000414579 1873 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.26□□□□□ -1.73
H3F3AP84243 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
H3F3AP84243 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3AP84243 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
H3F3AP84243 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H3F3AP84243 AL359922.3-201ENST00000624779 1670 ntBASIC4.26□□□□□ -1.73
H3F3AP84243 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
H3F3AP84243 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3AP84243 UGT2B26P-201ENST00000508672 1613 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3AP84243 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3AP84243 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
H3F3AP84243 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3AP84243 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3AP84243 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
H3F3AP84243 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3AP84243 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.25□□□□□ -1.73
H3F3AP84243 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3AP84243 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.25□□□□□ -1.73
H3F3AP84243 RPL7P57-201ENST00000423238 740 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 OR2B7P-201ENST00000429302 934 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 RPS27P18-201ENST00000431701 247 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.25□□□□□ -1.73
H3F3AP84243 AC005154.2-201ENST00000438110 379 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
H3F3AP84243 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.25□□□□□ -1.73
H3F3AP84243 RPL5P16-201ENST00000471467 790 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3AP84243 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
H3F3AP84243 AC105233.1-201ENST00000498840 781 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.25□□□□□ -1.73
H3F3AP84243 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.25□□□□□ -1.73
H3F3AP84243 RN7SKP5-201ENST00000517045 272 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3AP84243 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.25□□□□□ -1.73
H3F3AP84243 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.25□□□□□ -1.73
H3F3AP84243 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
H3F3AP84243 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.25□□□□□ -1.73
H3F3AP84243 AC096553.1-201ENST00000605169 829 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 AL139041.1-201ENST00000605480 610 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 AC024940.4-201ENST00000605507 246 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 SNORD91B-202ENST00000608459 222 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 FAM25E-202ENST00000608562 189 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 AC097505.1-201ENST00000610199 565 ntBASIC4.25□□□□□ -1.73
H3F3AP84243 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3AP84243 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3AP84243 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3AP84243 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3AP84243 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3AP84243 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.25□□□□□ -1.73
H3F3AP84243 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.25□□□□□ -1.73
H3F3AP84243 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3AP84243 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.25□□□□□ -1.73
H3F3AP84243 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3AP84243 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
H3F3AP84243 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
H3F3AP84243 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3AP84243 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.25□□□□□ -1.73
H3F3AP84243 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
H3F3AP84243 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.24□□□□□ -1.73
H3F3AP84243 AL929601.4-201ENST00000613011 1341 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 AL442639.1-201ENST00000625030 1899 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
H3F3AP84243 DDX18P4-201ENST00000511690 1966 ntBASIC4.24□□□□□ -1.73
H3F3AP84243 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
H3F3AP84243 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
H3F3AP84243 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
H3F3AP84243 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms