Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.53□□□□□ -1.52
CCNA1P78396 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.52□□□□□ -1.53
CCNA1P78396 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CCNA1P78396 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.52□□□□□ -1.53
CCNA1P78396 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.52□□□□□ -1.53
CCNA1P78396 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCNA1P78396 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCNA1P78396 AL442639.1-201ENST00000625030 1899 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCNA1P78396 HCFC2P1-201ENST00000392864 1592 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CCNA1P78396 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCNA1P78396 RNA5SP447-201ENST00000363749 119 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 RN7SKP227-201ENST00000364445 330 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CCNA1P78396 U3.22-201ENST00000391120 215 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNA1P78396 AC004690.1-201ENST00000418216 328 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 LINC00993-201ENST00000420453 540 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNA1P78396 OR5M12P-201ENST00000423388 929 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 CYCSP11-201ENST00000436426 315 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.52□□□□□ -1.53
CCNA1P78396 AL591623.2-201ENST00000449978 222 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 AC090602.1-201ENST00000469695 252 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
CCNA1P78396 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCNA1P78396 AC073358.1-201ENST00000505671 684 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 AC093840.1-201ENST00000511599 336 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNA1P78396 AL590392.1-201ENST00000604960 446 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCNA1P78396 AL121890.2-201ENST00000617644 465 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 AC002044.3-201ENST00000623314 541 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.52□□□□□ -1.53
CCNA1P78396 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCNA1P78396 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCNA1P78396 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNA1P78396 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNA1P78396 Z95331.1-201ENST00000623075 23112 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCNA1P78396 TRIM51GP-201ENST00000534741 1350 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 OR56B2P-202ENST00000641377 2453 ntBASIC5.52□□□□□ -1.53
CCNA1P78396 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNA1P78396 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCNA1P78396 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.51□□□□□ -1.53
CCNA1P78396 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCNA1P78396 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCNA1P78396 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 RNU4-39P-201ENST00000362455 127 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCNA1P78396 RN7SKP267-201ENST00000410381 285 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.51□□□□□ -1.53
CCNA1P78396 CHIAP3-201ENST00000423668 1133 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 RPL12P34-201ENST00000424532 479 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 RPS27AP6-201ENST00000427962 448 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.51□□□□□ -1.53
CCNA1P78396 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.51□□□□□ -1.53
CCNA1P78396 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.51□□□□□ -1.53
CCNA1P78396 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.51□□□□□ -1.53
CCNA1P78396 AC234775.3-201ENST00000564612 656 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.51□□□□□ -1.53
CCNA1P78396 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.51□□□□□ -1.53
CCNA1P78396 MIR5699-201ENST00000578903 90 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.51□□□□□ -1.53
CCNA1P78396 AC069061.3-201ENST00000582254 823 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.51□□□□□ -1.53
CCNA1P78396 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.51□□□□□ -1.53
CCNA1P78396 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCNA1P78396 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.51□□□□□ -1.53
CCNA1P78396 AC120338.1-201ENST00000625074 1541 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNA1P78396 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CCNA1P78396 AL450345.1-202ENST00000605741 3881 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.51□□□□□ -1.53
CCNA1P78396 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.51□□□□□ -1.53
CCNA1P78396 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCNA1P78396 SMG1P6-201ENST00000532337 2930 ntBASIC5.51□□□□□ -1.53
CCNA1P78396 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCNA1P78396 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.5□□□□□ -1.53
CCNA1P78396 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCNA1P78396 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCNA1P78396 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CCNA1P78396 OR51A6P-201ENST00000418680 1004 ntBASIC5.5□□□□□ -1.53
CCNA1P78396 UQCRBP1-201ENST00000421129 336 ntBASIC5.5□□□□□ -1.53
CCNA1P78396 VTI1BP4-201ENST00000427516 527 ntBASIC5.5□□□□□ -1.53
CCNA1P78396 RPS17P8-201ENST00000434525 335 ntBASIC5.5□□□□□ -1.53
CCNA1P78396 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.5□□□□□ -1.53
CCNA1P78396 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.5□□□□□ -1.53
CCNA1P78396 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.5□□□□□ -1.53
CCNA1P78396 AC091868.1-201ENST00000508746 304 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms