Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN20P56880 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 SMG1P4-204ENST00000523028 4131 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN20P56880 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN20P56880 CR788268.1-201ENST00000603931 1809 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 AC100757.1-201ENST00000616872 1835 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 HSPD1P11-201ENST00000508643 1702 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CLDN20P56880 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN20P56880 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN20P56880 ZNF733P-202ENST00000444809 1573 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN20P56880 STX3-208ENST00000641815 3236 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLDN20P56880 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN20P56880 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN20P56880 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN20P56880 AC004817.4-201ENST00000602396 3625 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AL672167.1-204ENST00000641875 3017 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN20P56880 AC017079.1-201ENST00000333650 415 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 U3.2-201ENST00000362981 210 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AC104297.1-201ENST00000393779 870 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AP002784.2-201ENST00000397300 549 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN20P56880 RNA5SP487-201ENST00000410186 122 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 RNU2-22P-201ENST00000411266 212 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 VN1R51P-201ENST00000411675 945 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 RPL12P9-201ENST00000412942 488 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 SLC35E1P1-201ENST00000419313 864 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN20P56880 AC245047.2-201ENST00000441060 530 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN20P56880 AC016772.1-201ENST00000444170 1261 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN20P56880 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN20P56880 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN20P56880 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLDN20P56880 RPS20P4-201ENST00000461659 355 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AP000797.2-201ENST00000475768 606 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AC058823.1-201ENST00000485315 474 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 RN7SL423P-201ENST00000486202 304 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 RN7SL214P-201ENST00000487317 265 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN20P56880 IMPA1P1-201ENST00000510718 842 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 SNORA31.13-201ENST00000516624 135 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 RNA5SP34-201ENST00000516887 130 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 HIGD1AP18-201ENST00000520730 278 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN20P56880 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN20P56880 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN20P56880 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN20P56880 AC006349.1-201ENST00000555526 235 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AC084759.1-201ENST00000561168 290 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN20P56880 DPRXP4-201ENST00000578053 568 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 RN7SL356P-201ENST00000582228 248 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN20P56880 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN20P56880 AC124016.2-201ENST00000610058 665 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 RNU6-1192P-201ENST00000612197 107 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 VN1R9P-201ENST00000614184 867 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 RMST_10.1-201ENST00000616309 154 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 RNU6-489P-201ENST00000618289 107 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN20P56880 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.82□□□□□ -1.64
CLDN20P56880 CYP4F35P-202ENST00000636121 390 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 AC073869.10-201ENST00000642016 354 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLDN20P56880 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN20P56880 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN20P56880 OR55B1P-203ENST00000641518 2602 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN20P56880 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN20P56880 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN20P56880 HSPD1P14-201ENST00000432666 1618 ntBASIC4.82□□□□□ -1.64
CLDN20P56880 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN20P56880 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLDN20P56880 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLDN20P56880 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 AC093591.2-201ENST00000565254 3843 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN20P56880 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLDN20P56880 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN20P56880 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CLDN20P56880 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN20P56880 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLDN20P56880 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLDN20P56880 AC005294.1-201ENST00000355509 281 ntBASIC4.81□□□□□ -1.64
CLDN20P56880 SNORD56.4-201ENST00000363883 71 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms