Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLDN6P56747 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN6P56747 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 AL356218.2-201ENST00000605264 187 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN6P56747 AC007497.1-201ENST00000610421 561 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 AL392048.1-201ENST00000613946 534 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 RBPJP2-201ENST00000618187 1444 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CLDN6P56747 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN6P56747 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN6P56747 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN6P56747 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN6P56747 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN6P56747 ECM1P2-201ENST00000503354 1577 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN6P56747 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN6P56747 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN6P56747 RNU6-167P-201ENST00000384292 106 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AL035079.1-201ENST00000405210 287 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN6P56747 SETP10-201ENST00000424368 814 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN6P56747 GAPDHP14-201ENST00000450472 937 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 PRPF38AP1-201ENST00000451976 933 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AL691482.1-201ENST00000453255 87 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AC010618.1-201ENST00000469924 477 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AC109327.1-201ENST00000471666 403 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN6P56747 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN6P56747 SCARNA22-201ENST00000503991 125 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AC073358.1-201ENST00000505671 684 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN6P56747 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN6P56747 AC133555.2-201ENST00000550213 292 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AC084824.1-201ENST00000550917 1005 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AL358913.1-201ENST00000554342 121 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN6P56747 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.67□□□□□ -1.66
CLDN6P56747 AC040958.1-201ENST00000561102 201 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 MIR3939-201ENST00000582614 106 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AP000919.1-201ENST00000582850 985 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 PRPF19P1-201ENST00000584766 898 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN6P56747 AC010487.1-201ENST00000594408 1172 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AC067959.1-201ENST00000604334 379 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AL713998.2-201ENST00000604538 1198 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AL159169.2-201ENST00000610061 1269 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 MIR6839-201ENST00000620425 113 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AC074140.1-201ENST00000621617 208 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AC011944.2-201ENST00000624440 683 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN6P56747 MAPK10-263ENST00000641052 4307 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN6P56747 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CLDN6P56747 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLDN6P56747 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN6P56747 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN6P56747 AC003985.2-201ENST00000562268 1669 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 AC068446.1-201ENST00000556425 1549 ntBASIC4.67□□□□□ -1.66
CLDN6P56747 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN6P56747 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN6P56747 SNORD113.2-201ENST00000364166 89 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN6P56747 AC007618.1-201ENST00000366455 732 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 SNORA37-201ENST00000384504 129 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 RPL12P9-201ENST00000412942 488 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 COX5BP7-201ENST00000414780 274 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 ATG4AP1-201ENST00000416893 538 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN6P56747 RPL12P34-201ENST00000424532 479 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN6P56747 CDC27P1-201ENST00000445384 715 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 AC000111.2-201ENST00000448200 210 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 AC011276.1-201ENST00000469688 323 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN6P56747 AC093840.1-201ENST00000511599 336 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 RNA5SP464-201ENST00000516251 108 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN6P56747 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN6P56747 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN6P56747 AL049839.1-201ENST00000556151 657 ntBASIC4.66□□□□□ -1.66
CLDN6P56747 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN6P56747 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms