Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH6P55285 RNA5SP103-201ENST00000459503 118 ntBASIC4.94□□□□□ -1.62
CDH6P55285 AC112206.1-201ENST00000468416 477 ntBASIC4.94□□□□□ -1.62
CDH6P55285 RPL7P16-201ENST00000479738 738 ntBASIC4.94□□□□□ -1.62
CDH6P55285 AC104971.1-201ENST00000495117 578 ntBASIC4.94□□□□□ -1.62
CDH6P55285 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH6P55285 AC091868.1-201ENST00000508746 304 ntBASIC4.94□□□□□ -1.62
CDH6P55285 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.94□□□□□ -1.62
CDH6P55285 RN7SKP46-201ENST00000515942 234 ntBASIC4.94□□□□□ -1.62
CDH6P55285 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH6P55285 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH6P55285 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH6P55285 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH6P55285 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH6P55285 AL137072.1-201ENST00000603444 466 ntBASIC4.94□□□□□ -1.62
CDH6P55285 AC133644.2-201ENST00000608142 540 ntBASIC4.94□□□□□ -1.62
CDH6P55285 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH6P55285 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH6P55285 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 AC131971.1-201ENST00000332881 1482 ntBASIC4.94□□□□□ -1.62
CDH6P55285 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH6P55285 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH6P55285 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH6P55285 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH6P55285 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CDH6P55285 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH6P55285 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH6P55285 SNORA74A-201ENST00000364089 198 ntBASIC4.93□□□□□ -1.62
CDH6P55285 MIR1271-201ENST00000408537 86 ntBASIC4.93□□□□□ -1.62
CDH6P55285 RN7SKP97-201ENST00000410966 333 ntBASIC4.93□□□□□ -1.62
CDH6P55285 RPL7P57-201ENST00000423238 740 ntBASIC4.93□□□□□ -1.62
CDH6P55285 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH6P55285 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH6P55285 FABP7P2-201ENST00000429946 379 ntBASIC4.93□□□□□ -1.62
CDH6P55285 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH6P55285 TMX2P1-201ENST00000436507 708 ntBASIC4.93□□□□□ -1.62
CDH6P55285 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH6P55285 TDGF1P1-201ENST00000445734 527 ntBASIC4.93□□□□□ -1.62
CDH6P55285 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.93□□□□□ -1.62
CDH6P55285 AC107015.1-201ENST00000466902 747 ntBASIC4.93□□□□□ -1.62
CDH6P55285 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH6P55285 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH6P55285 NPM1P29-201ENST00000483112 803 ntBASIC4.93□□□□□ -1.62
CDH6P55285 AP001960.1-201ENST00000506494 658 ntBASIC4.93□□□□□ -1.62
CDH6P55285 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH6P55285 NDUFB5P1-201ENST00000508134 564 ntBASIC4.93□□□□□ -1.62
CDH6P55285 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH6P55285 RNU1-6P-201ENST00000516290 144 ntBASIC4.93□□□□□ -1.62
CDH6P55285 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH6P55285 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.93□□□□□ -1.62
CDH6P55285 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.93□□□□□ -1.62
CDH6P55285 PCNPP1-201ENST00000552501 511 ntBASIC4.93□□□□□ -1.62
CDH6P55285 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH6P55285 BGLT3-201ENST00000564523 994 ntBASIC4.93□□□□□ -1.62
CDH6P55285 AC233702.9-201ENST00000581528 203 ntBASIC4.93□□□□□ -1.62
CDH6P55285 AC005084.1-201ENST00000605160 304 ntBASIC4.93□□□□□ -1.62
CDH6P55285 SNORA35B-201ENST00000607417 129 ntBASIC4.93□□□□□ -1.62
CDH6P55285 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH6P55285 AC090510.2-201ENST00000617465 629 ntBASIC4.93□□□□□ -1.62
CDH6P55285 AC022106.2-201ENST00000620114 757 ntBASIC4.93□□□□□ -1.62
CDH6P55285 AC011815.3-201ENST00000624194 473 ntBASIC4.93□□□□□ -1.62
CDH6P55285 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH6P55285 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.93□□□□□ -1.62
CDH6P55285 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH6P55285 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDH6P55285 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH6P55285 AC126323.6-202ENST00000568092 3511 ntBASIC4.92□□□□□ -1.62
CDH6P55285 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH6P55285 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH6P55285 AL133268.1-201ENST00000405676 1401 ntBASIC4.92□□□□□ -1.62
CDH6P55285 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH6P55285 MAPK10-263ENST00000641052 4307 ntBASIC4.92□□□□□ -1.62
CDH6P55285 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH6P55285 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH6P55285 RN7SKP149-201ENST00000363008 344 ntBASIC4.92□□□□□ -1.62
CDH6P55285 RNU6-1263P-201ENST00000384601 106 ntBASIC4.92□□□□□ -1.62
CDH6P55285 AL590762.2-201ENST00000395798 571 ntBASIC4.92□□□□□ -1.62
CDH6P55285 AC013470.3-201ENST00000420252 1194 ntBASIC4.92□□□□□ -1.62
CDH6P55285 RPL34P6-201ENST00000432390 345 ntBASIC4.92□□□□□ -1.62
CDH6P55285 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH6P55285 NPM1P33-201ENST00000438918 872 ntBASIC4.92□□□□□ -1.62
CDH6P55285 HIGD1AP8-201ENST00000453927 274 ntBASIC4.92□□□□□ -1.62
CDH6P55285 AL356390.1-201ENST00000455684 397 ntBASIC4.92□□□□□ -1.62
CDH6P55285 RPS5P7-201ENST00000456664 608 ntBASIC4.92□□□□□ -1.62
CDH6P55285 TPT1P1-201ENST00000458495 518 ntBASIC4.92□□□□□ -1.62
CDH6P55285 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH6P55285 AC108751.2-201ENST00000469993 231 ntBASIC4.92□□□□□ -1.62
CDH6P55285 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH6P55285 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH6P55285 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH6P55285 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH6P55285 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH6P55285 AP001922.4-201ENST00000526967 290 ntBASIC4.92□□□□□ -1.62
CDH6P55285 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH6P55285 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms