Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC005868.1-201ENST00000536421 331 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS2P54868 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGCS2P54868 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGCS2P54868 FKBP1BP1-201ENST00000553366 325 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 AC074050.1-201ENST00000563247 211 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGCS2P54868 AL583832.1-201ENST00000603227 784 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS2P54868 AL031658.2-201ENST00000616850 651 ntBASIC5.4□□□□□ -1.54
HMGCS2P54868 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCS2P54868 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
HMGCS2P54868 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCS2P54868 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCS2P54868 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCS2P54868 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCS2P54868 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS2P54868 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCS2P54868 AL022311.1-201ENST00000623726 19416 ntBASIC5.39□□□□□ -1.55
HMGCS2P54868 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS2P54868 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS2P54868 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCS2P54868 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HMGCS2P54868 OR4K17-201ENST00000315543 1032 ntBASIC5.39□□□□□ -1.55
HMGCS2P54868 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS2P54868 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS2P54868 OR1F12-201ENST00000402365 945 ntBASIC5.39□□□□□ -1.55
HMGCS2P54868 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS2P54868 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS2P54868 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCS2P54868 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.39□□□□□ -1.55
HMGCS2P54868 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCS2P54868 AC073073.1-201ENST00000493920 463 ntBASIC5.39□□□□□ -1.55
HMGCS2P54868 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS2P54868 AC138409.2-202ENST00000507274 458 ntBASIC5.39□□□□□ -1.55
HMGCS2P54868 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.39□□□□□ -1.55
HMGCS2P54868 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS2P54868 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCS2P54868 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCS2P54868 BNIP3P5-201ENST00000562290 498 ntBASIC5.39□□□□□ -1.55
HMGCS2P54868 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCS2P54868 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCS2P54868 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCS2P54868 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS2P54868 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS2P54868 ARF4P1-201ENST00000605447 541 ntBASIC5.39□□□□□ -1.55
HMGCS2P54868 AC114781.5-201ENST00000615297 108 ntBASIC5.39□□□□□ -1.55
HMGCS2P54868 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCS2P54868 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HMGCS2P54868 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HMGCS2P54868 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCS2P54868 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCS2P54868 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS2P54868 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS2P54868 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS2P54868 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS2P54868 AL136164.3-201ENST00000624429 3978 ntBASIC5.39□□□□□ -1.55
HMGCS2P54868 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS2P54868 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HMGCS2P54868 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS2P54868 MAPK10-328ENST00000641553 4009 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS2P54868 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS2P54868 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGCS2P54868 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS2P54868 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS2P54868 ARL4AP5-201ENST00000404372 599 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 TMBIM7P-201ENST00000418074 855 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGCS2P54868 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 SCARNA10-201ENST00000459255 330 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 AL049874.2-201ENST00000492636 288 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS2P54868 AC105031.1-201ENST00000518550 476 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.38□□□□□ -1.55
HMGCS2P54868 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGCS2P54868 AC006349.1-201ENST00000555526 235 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 MIR1254-2-201ENST00000579553 63 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS2P54868 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
HMGCS2P54868 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS2P54868 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS2P54868 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGCS2P54868 AP000432.2-201ENST00000624164 2048 ntBASIC5.38□□□□□ -1.55
HMGCS2P54868 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
HMGCS2P54868 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGCS2P54868 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS2P54868 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGCS2P54868 TET1P1-201ENST00000426627 2301 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGCS2P54868 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS2P54868 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS2P54868 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGCS2P54868 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HMGCS2P54868 ST13P16-201ENST00000401760 781 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 AL035696.2-201ENST00000407941 709 ntBASIC5.37□□□□□ -1.55
HMGCS2P54868 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS2P54868 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS2P54868 RGS17P1-201ENST00000423358 553 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms