Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.93□□□□□ -1.62
PDX1P52945 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDX1P52945 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.93□□□□□ -1.62
PDX1P52945 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.93□□□□□ -1.62
PDX1P52945 RNU6-398P-201ENST00000384143 109 ntBASIC4.93□□□□□ -1.62
PDX1P52945 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PDX1P52945 SNORA48.4-201ENST00000391089 134 ntBASIC4.93□□□□□ -1.62
PDX1P52945 RAB28P1-201ENST00000411517 641 ntBASIC4.93□□□□□ -1.62
PDX1P52945 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.93□□□□□ -1.62
PDX1P52945 ARL2BPP3-201ENST00000421226 480 ntBASIC4.93□□□□□ -1.62
PDX1P52945 AC006065.1-201ENST00000422539 802 ntBASIC4.93□□□□□ -1.62
PDX1P52945 RPS6P14-201ENST00000425165 719 ntBASIC4.93□□□□□ -1.62
PDX1P52945 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.93□□□□□ -1.62
PDX1P52945 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.93□□□□□ -1.62
PDX1P52945 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.93□□□□□ -1.62
PDX1P52945 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.93□□□□□ -1.62
PDX1P52945 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.93□□□□□ -1.62
PDX1P52945 NOP56P2-201ENST00000447491 769 ntBASIC4.93□□□□□ -1.62
PDX1P52945 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.93□□□□□ -1.62
PDX1P52945 OR52E3P-201ENST00000452083 936 ntBASIC4.93□□□□□ -1.62
PDX1P52945 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.93□□□□□ -1.62
PDX1P52945 RPL7P41-201ENST00000485823 957 ntBASIC4.93□□□□□ -1.62
PDX1P52945 RPL23AP73-201ENST00000492507 471 ntBASIC4.93□□□□□ -1.62
PDX1P52945 OR9N1P-202ENST00000494289 481 ntBASIC4.93□□□□□ -1.62
PDX1P52945 RPS24P16-201ENST00000497294 392 ntBASIC4.93□□□□□ -1.62
PDX1P52945 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 AC010468.3-201ENST00000508225 458 ntBASIC4.93□□□□□ -1.62
PDX1P52945 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.93□□□□□ -1.62
PDX1P52945 AC021146.7-201ENST00000509604 775 ntBASIC4.93□□□□□ -1.62
PDX1P52945 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.93□□□□□ -1.62
PDX1P52945 AC006427.1-201ENST00000514359 712 ntBASIC4.93□□□□□ -1.62
PDX1P52945 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.93□□□□□ -1.62
PDX1P52945 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.93□□□□□ -1.62
PDX1P52945 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.93□□□□□ -1.62
PDX1P52945 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.93□□□□□ -1.62
PDX1P52945 AC079148.1-201ENST00000565944 819 ntBASIC4.93□□□□□ -1.62
PDX1P52945 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.93□□□□□ -1.62
PDX1P52945 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.93□□□□□ -1.62
PDX1P52945 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PDX1P52945 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.93□□□□□ -1.62
PDX1P52945 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
PDX1P52945 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDX1P52945 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 TCP11X1-202ENST00000622971 1372 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDX1P52945 RN7SKP113-201ENST00000363891 295 ntBASIC4.92□□□□□ -1.62
PDX1P52945 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 RNU6-1176P-201ENST00000390955 107 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AP002530.1-201ENST00000405705 684 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AC092017.2-201ENST00000427600 362 ntBASIC4.92□□□□□ -1.62
PDX1P52945 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.92□□□□□ -1.62
PDX1P52945 SDR42E1P3-201ENST00000438345 502 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 AL513533.1-201ENST00000453728 415 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 AC022133.1-201ENST00000490961 571 ntBASIC4.92□□□□□ -1.62
PDX1P52945 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.92□□□□□ -1.62
PDX1P52945 MRPS33P2-201ENST00000507850 322 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.92□□□□□ -1.62
PDX1P52945 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.92□□□□□ -1.62
PDX1P52945 AC098976.1-201ENST00000513014 541 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AC103833.1-201ENST00000517442 172 ntBASIC4.92□□□□□ -1.62
PDX1P52945 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.92□□□□□ -1.62
PDX1P52945 AC022360.1-201ENST00000521058 340 ntBASIC4.92□□□□□ -1.62
PDX1P52945 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 AC027369.5-201ENST00000533838 755 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.92□□□□□ -1.62
PDX1P52945 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.92□□□□□ -1.62
PDX1P52945 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.92□□□□□ -1.62
PDX1P52945 BGLT3-201ENST00000564523 994 ntBASIC4.92□□□□□ -1.62
PDX1P52945 UBE2FP2-201ENST00000566646 462 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 MTCYBP13-201ENST00000578634 1093 ntBASIC4.92□□□□□ -1.62
PDX1P52945 MIR4270-201ENST00000581799 70 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AC209154.1-201ENST00000582156 337 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 AC068790.4-201ENST00000602474 263 ntBASIC4.92□□□□□ -1.62
PDX1P52945 MTCO2P22-201ENST00000603246 681 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AC105254.2-201ENST00000603636 436 ntBASIC4.92□□□□□ -1.62
PDX1P52945 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms