Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CNOT7P2-201ENST00000441051 832 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CR1P49238 MRPL48P1-201ENST00000445390 636 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CR1P49238 RPL31P20-201ENST00000449593 360 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 RHEBP2-201ENST00000450289 600 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 CALM1P2-201ENST00000452941 448 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CR1P49238 AC108751.2-201ENST00000469993 231 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 AC096741.1-201ENST00000472250 846 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 RN7SL319P-201ENST00000480656 221 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 AC116562.1-201ENST00000485355 781 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CR1P49238 AC026688.1-201ENST00000520639 1168 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CR1P49238 AC022832.1-201ENST00000530718 645 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 NPM1P35-201ENST00000533043 868 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CR1P49238 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CR1P49238 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CR1P49238 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CR1P49238 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.28□□□□□ -1.72
CX3CR1P49238 MIR1269B-201ENST00000580405 75 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CR1P49238 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CR1P49238 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CR1P49238 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CR1P49238 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CX3CR1P49238 DHX9P1-201ENST00000436565 3076 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CR1P49238 CASC19-206ENST00000641028 1430 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CX3CR1P49238 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CX3CR1P49238 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CR1P49238 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.27□□□□□ -1.73
CX3CR1P49238 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.27□□□□□ -1.73
CX3CR1P49238 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CR1P49238 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CR1P49238 RNU6-1251P-201ENST00000364502 107 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 AL357515.1-201ENST00000402967 542 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 TBCAP2-201ENST00000416175 326 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 BMS1P13-201ENST00000417301 885 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CR1P49238 RGS17P1-201ENST00000423358 553 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 CKS1BP6-201ENST00000424932 240 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 RHOT1P3-201ENST00000436571 331 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CR1P49238 PPIAP20-201ENST00000449839 135 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CR1P49238 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CR1P49238 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AP000942.1-201ENST00000463969 747 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AC090114.3-201ENST00000479267 829 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AL049874.4-201ENST00000557593 255 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 MIR4489-201ENST00000578869 62 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 SNORA74C-1-201ENST00000580726 201 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CR1P49238 MIR3176-201ENST00000582210 90 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 MIR4691-201ENST00000583764 85 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AC022467.1-201ENST00000614738 749 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CX3CR1P49238 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CR1P49238 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CX3CR1P49238 AC008758.3-201ENST00000507003 1829 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 SALL4P2-201ENST00000423288 2910 ntBASIC4.27□□□□□ -1.73
CX3CR1P49238 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CR1P49238 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CX3CR1P49238 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CR1P49238 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CR1P49238 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CR1P49238 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CX3CR1P49238 AL359922.3-201ENST00000624779 1670 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.26□□□□□ -1.73
CX3CR1P49238 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CR1P49238 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms