Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSR1P43307 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSR1P43307 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSR1P43307 AC005522.1-201ENST00000395416 346 ntBASIC5.25□□□□□ -1.57
SSR1P43307 LRRC37BP1-201ENST00000398851 714 ntBASIC5.25□□□□□ -1.57
SSR1P43307 AP000534.2-201ENST00000412729 568 ntBASIC5.25□□□□□ -1.57
SSR1P43307 RAC1P3-201ENST00000416129 580 ntBASIC5.25□□□□□ -1.57
SSR1P43307 QRSL1P2-201ENST00000418582 964 ntBASIC5.25□□□□□ -1.57
SSR1P43307 RPL7P57-201ENST00000423238 740 ntBASIC5.25□□□□□ -1.57
SSR1P43307 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.25□□□□□ -1.57
SSR1P43307 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.25□□□□□ -1.57
SSR1P43307 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.25□□□□□ -1.57
SSR1P43307 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.25□□□□□ -1.57
SSR1P43307 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.25□□□□□ -1.57
SSR1P43307 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.25□□□□□ -1.57
SSR1P43307 MYO5BP2-201ENST00000449815 1277 ntBASIC5.25□□□□□ -1.57
SSR1P43307 AC092647.2-201ENST00000452998 253 ntBASIC5.25□□□□□ -1.57
SSR1P43307 GYG1P1-201ENST00000460864 698 ntBASIC5.25□□□□□ -1.57
SSR1P43307 AC072052.1-201ENST00000496556 306 ntBASIC5.25□□□□□ -1.57
SSR1P43307 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.25□□□□□ -1.57
SSR1P43307 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.25□□□□□ -1.57
SSR1P43307 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.25□□□□□ -1.57
SSR1P43307 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.25□□□□□ -1.57
SSR1P43307 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.25□□□□□ -1.57
SSR1P43307 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.25□□□□□ -1.57
SSR1P43307 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSR1P43307 OR11J2P-201ENST00000555298 907 ntBASIC5.25□□□□□ -1.57
SSR1P43307 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.25□□□□□ -1.57
SSR1P43307 AC019206.1-201ENST00000621938 425 ntBASIC5.25□□□□□ -1.57
SSR1P43307 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.25□□□□□ -1.57
SSR1P43307 AC073869.10-201ENST00000642016 354 ntBASIC5.25□□□□□ -1.57
SSR1P43307 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.25□□□□□ -1.57
SSR1P43307 AL592437.2-201ENST00000421655 2434 ntBASIC5.25□□□□□ -1.57
SSR1P43307 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.25□□□□□ -1.57
SSR1P43307 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.25□□□□□ -1.57
SSR1P43307 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SSR1P43307 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.24□□□□□ -1.57
SSR1P43307 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSR1P43307 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSR1P43307 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSR1P43307 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.24□□□□□ -1.57
SSR1P43307 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSR1P43307 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSR1P43307 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSR1P43307 IL6STP1-201ENST00000346911 1020 ntBASIC5.24□□□□□ -1.57
SSR1P43307 SNORA73.1-201ENST00000363107 205 ntBASIC5.24□□□□□ -1.57
SSR1P43307 RN7SKP44-201ENST00000363602 316 ntBASIC5.24□□□□□ -1.57
SSR1P43307 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSR1P43307 MIR223-201ENST00000385204 110 ntBASIC5.24□□□□□ -1.57
SSR1P43307 AC013442.1-201ENST00000397347 228 ntBASIC5.24□□□□□ -1.57
SSR1P43307 AL391361.1-201ENST00000405580 489 ntBASIC5.24□□□□□ -1.57
SSR1P43307 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.24□□□□□ -1.57
SSR1P43307 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSR1P43307 RN7SKP206-201ENST00000410823 293 ntBASIC5.24□□□□□ -1.57
SSR1P43307 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.24□□□□□ -1.57
SSR1P43307 AL160275.2-201ENST00000412010 394 ntBASIC5.24□□□□□ -1.57
SSR1P43307 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.24□□□□□ -1.57
SSR1P43307 AL138787.1-202ENST00000437804 898 ntBASIC5.24□□□□□ -1.57
SSR1P43307 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSR1P43307 TCEA1P1-201ENST00000449716 880 ntBASIC5.24□□□□□ -1.57
SSR1P43307 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.24□□□□□ -1.57
SSR1P43307 RN7SL172P-201ENST00000460535 303 ntBASIC5.24□□□□□ -1.57
SSR1P43307 RN7SL30P-201ENST00000488416 306 ntBASIC5.24□□□□□ -1.57
SSR1P43307 AC073358.1-201ENST00000505671 684 ntBASIC5.24□□□□□ -1.57
SSR1P43307 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.24□□□□□ -1.57
SSR1P43307 RNA5SP249-201ENST00000516127 99 ntBASIC5.24□□□□□ -1.57
SSR1P43307 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.24□□□□□ -1.57
SSR1P43307 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.24□□□□□ -1.57
SSR1P43307 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.24□□□□□ -1.57
SSR1P43307 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.24□□□□□ -1.57
SSR1P43307 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.24□□□□□ -1.57
SSR1P43307 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.24□□□□□ -1.57
SSR1P43307 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.24□□□□□ -1.57
SSR1P43307 EIF1P5-201ENST00000585002 234 ntBASIC5.24□□□□□ -1.57
SSR1P43307 AC025946.2-201ENST00000603398 234 ntBASIC5.24□□□□□ -1.57
SSR1P43307 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.24□□□□□ -1.57
SSR1P43307 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.24□□□□□ -1.57
SSR1P43307 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.24□□□□□ -1.57
SSR1P43307 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSR1P43307 AL445437.1-201ENST00000623157 3087 ntBASIC5.24□□□□□ -1.57
SSR1P43307 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SSR1P43307 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.24□□□□□ -1.57
SSR1P43307 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SSR1P43307 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSR1P43307 AC114546.3-201ENST00000623582 1734 ntBASIC5.23□□□□□ -1.57
SSR1P43307 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SSR1P43307 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSR1P43307 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.23□□□□□ -1.57
SSR1P43307 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSR1P43307 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SSR1P43307 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.23□□□□□ -1.57
SSR1P43307 RNA5SP455-201ENST00000365190 119 ntBASIC5.23□□□□□ -1.57
SSR1P43307 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSR1P43307 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSR1P43307 MIR3074-201ENST00000384885 81 ntBASIC5.23□□□□□ -1.57
SSR1P43307 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.23□□□□□ -1.57
SSR1P43307 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.23□□□□□ -1.57
SSR1P43307 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.23□□□□□ -1.57
SSR1P43307 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.23□□□□□ -1.57
SSR1P43307 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms