Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RORAP35398 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RORAP35398 MAPK10-320ENST00000641462 6696 ntBASIC4.73□□□□□ -1.65
RORAP35398 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.73□□□□□ -1.65
RORAP35398 SDAD1P1-202ENST00000524156 2051 ntBASIC4.73□□□□□ -1.65
RORAP35398 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RORAP35398 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RORAP35398 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RORAP35398 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RORAP35398 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RORAP35398 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
RORAP35398 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RORAP35398 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RORAP35398 SNORA56-201ENST00000383966 129 ntBASIC4.72□□□□□ -1.65
RORAP35398 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.72□□□□□ -1.65
RORAP35398 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.72□□□□□ -1.65
RORAP35398 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.72□□□□□ -1.65
RORAP35398 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.72□□□□□ -1.65
RORAP35398 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.72□□□□□ -1.65
RORAP35398 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 TMX2P1-201ENST00000436507 708 ntBASIC4.72□□□□□ -1.65
RORAP35398 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RORAP35398 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.72□□□□□ -1.65
RORAP35398 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.72□□□□□ -1.65
RORAP35398 AC063943.1-201ENST00000465434 453 ntBASIC4.72□□□□□ -1.65
RORAP35398 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RORAP35398 AP001960.1-201ENST00000506494 658 ntBASIC4.72□□□□□ -1.65
RORAP35398 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 BTG4P1-201ENST00000510421 183 ntBASIC4.72□□□□□ -1.65
RORAP35398 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.72□□□□□ -1.65
RORAP35398 OR7H2P-201ENST00000513483 306 ntBASIC4.72□□□□□ -1.65
RORAP35398 snoU109.6-201ENST00000516831 118 ntBASIC4.72□□□□□ -1.65
RORAP35398 AC012339.2-201ENST00000523996 453 ntBASIC4.72□□□□□ -1.65
RORAP35398 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.72□□□□□ -1.65
RORAP35398 CR383656.6-201ENST00000550518 394 ntBASIC4.72□□□□□ -1.65
RORAP35398 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.72□□□□□ -1.65
RORAP35398 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.72□□□□□ -1.65
RORAP35398 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.72□□□□□ -1.65
RORAP35398 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 AC104118.1-201ENST00000607625 1589 ntBASIC4.72□□□□□ -1.65
RORAP35398 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RORAP35398 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.72□□□□□ -1.65
RORAP35398 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.72□□□□□ -1.65
RORAP35398 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RORAP35398 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.72□□□□□ -1.65
RORAP35398 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RORAP35398 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RORAP35398 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.65
RORAP35398 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RORAP35398 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RORAP35398 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RORAP35398 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RORAP35398 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.71□□□□□ -1.66
RORAP35398 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RORAP35398 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RORAP35398 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RORAP35398 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.71□□□□□ -1.66
RORAP35398 MT-RNR1-201ENST00000389680 954 ntBASIC4.71□□□□□ -1.66
RORAP35398 RNA5SP113-201ENST00000410486 84 ntBASIC4.71□□□□□ -1.66
RORAP35398 RAB9AP4-201ENST00000415230 609 ntBASIC4.71□□□□□ -1.66
RORAP35398 RPL26P29-201ENST00000415623 438 ntBASIC4.71□□□□□ -1.66
RORAP35398 AL590139.1-201ENST00000416267 400 ntBASIC4.71□□□□□ -1.66
RORAP35398 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.71□□□□□ -1.66
RORAP35398 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.71□□□□□ -1.66
RORAP35398 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.71□□□□□ -1.66
RORAP35398 MTND6P18-201ENST00000439477 513 ntBASIC4.71□□□□□ -1.66
RORAP35398 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.71□□□□□ -1.66
RORAP35398 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.71□□□□□ -1.66
RORAP35398 CYCSP24-201ENST00000445119 316 ntBASIC4.71□□□□□ -1.66
RORAP35398 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.71□□□□□ -1.66
RORAP35398 MYL12BP2-201ENST00000503948 512 ntBASIC4.71□□□□□ -1.66
RORAP35398 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.71□□□□□ -1.66
RORAP35398 AC022882.1-201ENST00000532142 501 ntBASIC4.71□□□□□ -1.66
RORAP35398 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.71□□□□□ -1.66
RORAP35398 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.71□□□□□ -1.66
RORAP35398 MIR3667-201ENST00000581025 74 ntBASIC4.71□□□□□ -1.66
RORAP35398 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.71□□□□□ -1.66
RORAP35398 AL391358.1-201ENST00000605342 190 ntBASIC4.71□□□□□ -1.66
RORAP35398 AC239803.2-201ENST00000610161 430 ntBASIC4.71□□□□□ -1.66
RORAP35398 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.71□□□□□ -1.66
RORAP35398 AC022106.2-201ENST00000620114 757 ntBASIC4.71□□□□□ -1.66
RORAP35398 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RORAP35398 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.71□□□□□ -1.66
RORAP35398 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.71□□□□□ -1.66
RORAP35398 AC099654.2-201ENST00000433031 1980 ntBASIC4.71□□□□□ -1.66
RORAP35398 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.71□□□□□ -1.66
RORAP35398 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.71□□□□□ -1.66
RORAP35398 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.7□□□□□ -1.66
RORAP35398 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
RORAP35398 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RORAP35398 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RORAP35398 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms