Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 CASC19-281ENST00000642118 1554 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 METTL21EP-201ENST00000298105 713 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SLC6A4P31645 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
SLC6A4P31645 MT-TP-201ENST00000387461 68 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 RNU1-77P-201ENST00000390868 162 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 MCTS2P-201ENST00000394552 546 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 MIR937-201ENST00000401271 86 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 MIR1178-201ENST00000408396 91 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 ELOCP9-201ENST00000418624 239 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC6A4P31645 NANOGP2-201ENST00000435391 727 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 CYCSP12-201ENST00000437729 300 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC6A4P31645 AC002542.1-201ENST00000440683 193 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 SPRYD7P1-201ENST00000443861 570 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC6A4P31645 AL445669.2-201ENST00000454425 421 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 ATP5LP5-201ENST00000483050 299 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 SUMO2P4-201ENST00000504193 276 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 HPRT1P2-201ENST00000505250 544 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC6A4P31645 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC6A4P31645 RNU5A-4P-201ENST00000516588 111 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 RN7SKP99-201ENST00000517028 307 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.69□□□□□ -1.5
SLC6A4P31645 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC6A4P31645 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC6A4P31645 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC6A4P31645 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.69□□□□□ -1.5
SLC6A4P31645 DUX4L52-201ENST00000549363 777 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.69□□□□□ -1.5
SLC6A4P31645 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.69□□□□□ -1.5
SLC6A4P31645 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC6A4P31645 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SLC6A4P31645 MTCYBP33-201ENST00000575007 1130 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 AP005403.1-201ENST00000579720 229 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 FKBP1AP1-201ENST00000594588 318 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 AL109653.1-201ENST00000603091 248 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 AC021749.1-201ENST00000604322 607 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 AL158042.1-201ENST00000605338 460 ntBASIC5.69□□□□□ -1.5
SLC6A4P31645 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC6A4P31645 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC6A4P31645 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC6A4P31645 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SLC6A4P31645 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC6A4P31645 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC6A4P31645 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A4P31645 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
SLC6A4P31645 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SLC6A4P31645 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC6A4P31645 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC6A4P31645 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC6A4P31645 OR4F13P-202ENST00000560066 2054 ntBASIC5.68□□□□□ -1.5
SLC6A4P31645 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC6A4P31645 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC6A4P31645 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC6A4P31645 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC6A4P31645 Y_RNA.169-201ENST00000363745 96 ntBASIC5.68□□□□□ -1.5
SLC6A4P31645 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC6A4P31645 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AC009804.1-201ENST00000400949 179 ntBASIC5.68□□□□□ -1.5
SLC6A4P31645 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AL008987.1-201ENST00000415528 237 ntBASIC5.68□□□□□ -1.5
SLC6A4P31645 OR10T1P-201ENST00000424327 947 ntBASIC5.68□□□□□ -1.5
SLC6A4P31645 AC092170.1-201ENST00000440211 356 ntBASIC5.68□□□□□ -1.5
SLC6A4P31645 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC6A4P31645 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC6A4P31645 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.68□□□□□ -1.5
SLC6A4P31645 ART2BP-201ENST00000453501 499 ntBASIC5.68□□□□□ -1.5
SLC6A4P31645 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AC093890.1-201ENST00000502554 540 ntBASIC5.68□□□□□ -1.5
SLC6A4P31645 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 BX510359.5-201ENST00000515651 304 ntBASIC5.68□□□□□ -1.5
SLC6A4P31645 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AC122688.1-201ENST00000541494 223 ntBASIC5.68□□□□□ -1.5
SLC6A4P31645 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC6A4P31645 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
SLC6A4P31645 IMMP1LP3-201ENST00000604197 224 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms