Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA9P31269 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA9P31269 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXA9P31269 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HOXA9P31269 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA9P31269 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA9P31269 BTBD10P1-201ENST00000549824 1352 ntBASIC5.02□□□□□ -1.61
HOXA9P31269 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA9P31269 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA9P31269 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA9P31269 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
HOXA9P31269 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA9P31269 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA9P31269 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA9P31269 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA9P31269 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA9P31269 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA9P31269 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.01□□□□□ -1.61
HOXA9P31269 QRSL1P2-201ENST00000418582 964 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 RPL12P34-201ENST00000424532 479 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 HSPE1P16-201ENST00000426640 348 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 AC023141.6-201ENST00000429418 337 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 AC092162.1-201ENST00000432828 434 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA9P31269 AC073358.1-201ENST00000505671 684 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA9P31269 RN7SKP122-201ENST00000515923 296 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 AP002981.1-201ENST00000517692 975 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 AC100784.1-201ENST00000522790 310 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA9P31269 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA9P31269 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA9P31269 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA9P31269 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA9P31269 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA9P31269 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HOXA9P31269 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HOXA9P31269 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA9P31269 AC068446.1-201ENST00000556425 1549 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA9P31269 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA9P31269 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA9P31269 AC083843.2-201ENST00000568248 6253 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA9P31269 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA9P31269 AL606537.1-201ENST00000607258 2011 ntBASIC5.01□□□□□ -1.61
HOXA9P31269 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
HOXA9P31269 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 AC093775.1-201ENST00000624154 1868 ntBASIC5□□□□□ -1.61
HOXA9P31269 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 AC139713.2-214ENST00000642059 1811 ntBASIC5□□□□□ -1.61
HOXA9P31269 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA9P31269 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5□□□□□ -1.61
HOXA9P31269 MTND5P23-201ENST00000430812 1655 ntBASIC5□□□□□ -1.61
HOXA9P31269 AC245100.2-201ENST00000454544 1679 ntBASIC5□□□□□ -1.61
HOXA9P31269 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
HOXA9P31269 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA9P31269 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA9P31269 RNU4-39P-201ENST00000362455 127 ntBASIC5□□□□□ -1.61
HOXA9P31269 RPL21P67-201ENST00000402896 478 ntBASIC5□□□□□ -1.61
HOXA9P31269 CTSL3P-202ENST00000412179 788 ntBASIC5□□□□□ -1.61
HOXA9P31269 AC004690.1-201ENST00000418216 328 ntBASIC5□□□□□ -1.61
HOXA9P31269 AC140479.3-201ENST00000418944 1126 ntBASIC5□□□□□ -1.61
HOXA9P31269 OR6C64P-201ENST00000419708 825 ntBASIC5□□□□□ -1.61
HOXA9P31269 GLUD1P9-201ENST00000420997 1173 ntBASIC5□□□□□ -1.61
HOXA9P31269 UQCRBP1-201ENST00000421129 336 ntBASIC5□□□□□ -1.61
HOXA9P31269 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5□□□□□ -1.61
HOXA9P31269 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 AC073052.1-201ENST00000440417 714 ntBASIC5□□□□□ -1.61
HOXA9P31269 AL591363.1-201ENST00000450091 483 ntBASIC5□□□□□ -1.61
HOXA9P31269 Z95152.1-201ENST00000453556 656 ntBASIC5□□□□□ -1.61
HOXA9P31269 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA9P31269 AC073073.1-201ENST00000493920 463 ntBASIC5□□□□□ -1.61
HOXA9P31269 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA9P31269 RFPL4AP3-201ENST00000515267 345 ntBASIC5□□□□□ -1.61
HOXA9P31269 RPS27AP18-201ENST00000515536 459 ntBASIC5□□□□□ -1.61
HOXA9P31269 AC105129.1-201ENST00000560250 297 ntBASIC5□□□□□ -1.61
HOXA9P31269 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 AC073091.2-201ENST00000603205 907 ntBASIC5□□□□□ -1.61
HOXA9P31269 AL139041.1-201ENST00000605480 610 ntBASIC5□□□□□ -1.61
HOXA9P31269 AL445423.1-201ENST00000609941 536 ntBASIC5□□□□□ -1.61
HOXA9P31269 AP001005.3-201ENST00000622049 129 ntBASIC5□□□□□ -1.61
HOXA9P31269 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
HOXA9P31269 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA9P31269 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA9P31269 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA9P31269 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HOXA9P31269 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA9P31269 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5□□□□□ -1.61
HOXA9P31269 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.99□□□□□ -1.61
HOXA9P31269 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXA9P31269 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HOXA9P31269 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms