Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPREP23469 Y_RNA.635-201ENST00000459041 101 ntBASIC8.36□□□□□ -1.07
PTPREP23469 AC117395.2-201ENST00000463122 1128 ntBASIC8.36□□□□□ -1.07
PTPREP23469 DUBR-205ENST00000495228 411 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPREP23469 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPREP23469 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPREP23469 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC8.36□□□□□ -1.07
PTPREP23469 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPREP23469 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPREP23469 SNORA48.10-201ENST00000516965 160 ntBASIC8.36□□□□□ -1.07
PTPREP23469 RN7SKP295-201ENST00000517264 153 ntBASIC8.36□□□□□ -1.07
PTPREP23469 COX6B1P4-201ENST00000519826 484 ntBASIC8.36□□□□□ -1.07
PTPREP23469 MIR4470-201ENST00000583453 72 ntBASIC8.36□□□□□ -1.07
PTPREP23469 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.36□□□□□ -1.07
PTPREP23469 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 APOOP1-201ENST00000604695 592 ntBASIC8.36□□□□□ -1.07
PTPREP23469 FAM157A-202ENST00000615155 405 ntBASIC8.36□□□□□ -1.07
PTPREP23469 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.36□□□□□ -1.07
PTPREP23469 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTPREP23469 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
PTPREP23469 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
PTPREP23469 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
PTPREP23469 AC090771.1-201ENST00000585803 1618 ntBASIC8.36□□□□□ -1.07
PTPREP23469 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.36□□□□□ -1.07
PTPREP23469 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC8.35□□□□□ -1.07
PTPREP23469 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 AL359396.1-201ENST00000623151 2376 ntBASIC8.35□□□□□ -1.07
PTPREP23469 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.35□□□□□ -1.07
PTPREP23469 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 AL590065.1-201ENST00000603371 4774 ntBASIC8.35□□□□□ -1.07
PTPREP23469 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.35□□□□□ -1.07
PTPREP23469 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PTPREP23469 Y_RNA.112-201ENST00000363250 102 ntBASIC8.35□□□□□ -1.07
PTPREP23469 Y_RNA.135-201ENST00000363439 95 ntBASIC8.35□□□□□ -1.07
PTPREP23469 MTCO2P33-201ENST00000402100 465 ntBASIC8.35□□□□□ -1.07
PTPREP23469 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 GAPDHP42-201ENST00000406848 981 ntBASIC8.35□□□□□ -1.07
PTPREP23469 AC244452.1-201ENST00000413798 141 ntBASIC8.35□□□□□ -1.07
PTPREP23469 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.35□□□□□ -1.07
PTPREP23469 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 AP001324.1-201ENST00000428553 399 ntBASIC8.35□□□□□ -1.07
PTPREP23469 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC8.35□□□□□ -1.07
PTPREP23469 AC073900.1-201ENST00000429766 776 ntBASIC8.35□□□□□ -1.07
PTPREP23469 PUDPP2-201ENST00000431423 643 ntBASIC8.35□□□□□ -1.07
PTPREP23469 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC8.35□□□□□ -1.07
PTPREP23469 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC8.35□□□□□ -1.07
PTPREP23469 RN7SL372P-201ENST00000461982 298 ntBASIC8.35□□□□□ -1.07
PTPREP23469 AC108693.1-201ENST00000496068 432 ntBASIC8.35□□□□□ -1.07
PTPREP23469 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC8.35□□□□□ -1.07
PTPREP23469 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 AC009812.2-201ENST00000517657 457 ntBASIC8.35□□□□□ -1.07
PTPREP23469 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC8.35□□□□□ -1.07
PTPREP23469 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC8.35□□□□□ -1.07
PTPREP23469 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC8.35□□□□□ -1.07
PTPREP23469 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC8.35□□□□□ -1.07
PTPREP23469 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 AC018462.2-201ENST00000605375 395 ntBASIC8.35□□□□□ -1.07
PTPREP23469 MIR8089-201ENST00000620165 82 ntBASIC8.35□□□□□ -1.07
PTPREP23469 AC005753.1-201ENST00000623837 618 ntBASIC8.35□□□□□ -1.07
PTPREP23469 AC138627.2-201ENST00000624202 601 ntBASIC8.35□□□□□ -1.07
PTPREP23469 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 OR4G1P-203ENST00000641984 1631 ntBASIC8.35□□□□□ -1.07
PTPREP23469 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 HSP90AA2P-201ENST00000530115 2196 ntBASIC8.35□□□□□ -1.07
PTPREP23469 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
PTPREP23469 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.35□□□□□ -1.07
PTPREP23469 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTPREP23469 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPREP23469 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPREP23469 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPREP23469 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
PTPREP23469 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.34□□□□□ -1.07
PTPREP23469 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTPREP23469 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.34□□□□□ -1.07
PTPREP23469 AC138207.6-201ENST00000579164 1967 ntBASIC8.34□□□□□ -1.07
PTPREP23469 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 1511.1 ms