Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 MIR7641-1-201ENST00000627518 61 ntBASIC4.24□□□□□ -1.73
USF1P22415 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.24□□□□□ -1.73
USF1P22415 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF1P22415 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.24□□□□□ -1.73
USF1P22415 AC006210.2-201ENST00000367074 1545 ntBASIC4.24□□□□□ -1.73
USF1P22415 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.24□□□□□ -1.73
USF1P22415 AL731532.2-201ENST00000623542 1953 ntBASIC4.23□□□□□ -1.73
USF1P22415 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF1P22415 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF1P22415 AC025574.1-201ENST00000554784 1653 ntBASIC4.23□□□□□ -1.73
USF1P22415 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.23□□□□□ -1.73
USF1P22415 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF1P22415 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF1P22415 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.23□□□□□ -1.73
USF1P22415 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF1P22415 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USF1P22415 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
USF1P22415 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
USF1P22415 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.23□□□□□ -1.73
USF1P22415 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.23□□□□□ -1.73
USF1P22415 OR51A6P-201ENST00000418680 1004 ntBASIC4.23□□□□□ -1.73
USF1P22415 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.23□□□□□ -1.73
USF1P22415 RPL21P133-201ENST00000443666 476 ntBASIC4.23□□□□□ -1.73
USF1P22415 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.23□□□□□ -1.73
USF1P22415 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.23□□□□□ -1.73
USF1P22415 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 AC021660.1-201ENST00000465006 554 ntBASIC4.23□□□□□ -1.73
USF1P22415 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF1P22415 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.23□□□□□ -1.73
USF1P22415 AC010350.1-201ENST00000504908 231 ntBASIC4.23□□□□□ -1.73
USF1P22415 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.23□□□□□ -1.73
USF1P22415 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.23□□□□□ -1.73
USF1P22415 AC018442.3-201ENST00000523025 183 ntBASIC4.23□□□□□ -1.73
USF1P22415 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
USF1P22415 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.23□□□□□ -1.73
USF1P22415 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.23□□□□□ -1.73
USF1P22415 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.23□□□□□ -1.73
USF1P22415 AC091042.1-201ENST00000579213 173 ntBASIC4.23□□□□□ -1.73
USF1P22415 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 AC011626.1-201ENST00000604710 562 ntBASIC4.23□□□□□ -1.73
USF1P22415 AL135786.2-201ENST00000608422 615 ntBASIC4.23□□□□□ -1.73
USF1P22415 MIR378J-201ENST00000611988 109 ntBASIC4.23□□□□□ -1.73
USF1P22415 AL731566.2-201ENST00000618971 317 ntBASIC4.23□□□□□ -1.73
USF1P22415 AP001005.3-201ENST00000622049 129 ntBASIC4.23□□□□□ -1.73
USF1P22415 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.23□□□□□ -1.73
USF1P22415 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF1P22415 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USF1P22415 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
USF1P22415 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
USF1P22415 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF1P22415 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF1P22415 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF1P22415 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
USF1P22415 AC120338.1-201ENST00000625074 1541 ntBASIC4.22□□□□□ -1.73
USF1P22415 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF1P22415 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF1P22415 AL450345.1-202ENST00000605741 3881 ntBASIC4.22□□□□□ -1.73
USF1P22415 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
USF1P22415 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.22□□□□□ -1.73
USF1P22415 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF1P22415 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF1P22415 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF1P22415 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF1P22415 RNU6-398P-201ENST00000384143 109 ntBASIC4.22□□□□□ -1.73
USF1P22415 AC007738.1-201ENST00000413892 348 ntBASIC4.22□□□□□ -1.73
USF1P22415 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.22□□□□□ -1.73
USF1P22415 AC119751.6-201ENST00000416712 186 ntBASIC4.22□□□□□ -1.73
USF1P22415 AC019050.1-201ENST00000418508 492 ntBASIC4.22□□□□□ -1.73
USF1P22415 DNAJC19P7-201ENST00000428811 344 ntBASIC4.22□□□□□ -1.73
USF1P22415 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.22□□□□□ -1.73
USF1P22415 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.22□□□□□ -1.73
USF1P22415 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.22□□□□□ -1.73
USF1P22415 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.22□□□□□ -1.73
USF1P22415 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.22□□□□□ -1.73
USF1P22415 AC011753.3-201ENST00000443436 406 ntBASIC4.22□□□□□ -1.73
USF1P22415 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.22□□□□□ -1.73
USF1P22415 NOP56P2-201ENST00000447491 769 ntBASIC4.22□□□□□ -1.73
USF1P22415 MTND4LP12-201ENST00000448237 295 ntBASIC4.22□□□□□ -1.73
USF1P22415 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.22□□□□□ -1.73
USF1P22415 AC006967.1-201ENST00000467608 589 ntBASIC4.22□□□□□ -1.73
USF1P22415 NDUFA5P9-201ENST00000472609 340 ntBASIC4.22□□□□□ -1.73
USF1P22415 AC093267.1-201ENST00000489176 961 ntBASIC4.22□□□□□ -1.73
USF1P22415 GAPDHP56-201ENST00000506031 988 ntBASIC4.22□□□□□ -1.73
USF1P22415 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.22□□□□□ -1.73
USF1P22415 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.22□□□□□ -1.73
USF1P22415 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.22□□□□□ -1.73
USF1P22415 IGKV1-32-201ENST00000519290 311 ntBASIC4.22□□□□□ -1.73
USF1P22415 OR5AN2P-201ENST00000534535 896 ntBASIC4.22□□□□□ -1.73
USF1P22415 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.22□□□□□ -1.73
USF1P22415 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.22□□□□□ -1.73
USF1P22415 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms