Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CFTRP13569 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CFTRP13569 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
CFTRP13569 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CFTRP13569 AC239868.2-201ENST00000564237 4527 ntBASIC7.74□□□□□ -1.17
CFTRP13569 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
CFTRP13569 AL356276.2-201ENST00000435919 558 ntBASIC7.74□□□□□ -1.17
CFTRP13569 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.74□□□□□ -1.17
CFTRP13569 AP001804.2-201ENST00000533932 910 ntBASIC7.74□□□□□ -1.17
CFTRP13569 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.74□□□□□ -1.17
CFTRP13569 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.74□□□□□ -1.17
CFTRP13569 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.74□□□□□ -1.17
CFTRP13569 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.74□□□□□ -1.17
CFTRP13569 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.74□□□□□ -1.17
CFTRP13569 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC7.74□□□□□ -1.17
CFTRP13569 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
CFTRP13569 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC7.74□□□□□ -1.17
CFTRP13569 AC012442.3-202ENST00000636742 206 ntBASIC7.74□□□□□ -1.17
CFTRP13569 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CFTRP13569 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CFTRP13569 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.73□□□□□ -1.17
CFTRP13569 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CFTRP13569 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.73□□□□□ -1.17
CFTRP13569 RPS3AP25-201ENST00000411660 793 ntBASIC7.73□□□□□ -1.17
CFTRP13569 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC7.73□□□□□ -1.17
CFTRP13569 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC7.73□□□□□ -1.17
CFTRP13569 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.73□□□□□ -1.17
CFTRP13569 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.73□□□□□ -1.17
CFTRP13569 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.73□□□□□ -1.17
CFTRP13569 AC079587.1-201ENST00000603846 277 ntBASIC7.73□□□□□ -1.17
CFTRP13569 AC022417.1-201ENST00000624768 1303 ntBASIC7.73□□□□□ -1.17
CFTRP13569 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC7.73□□□□□ -1.17
CFTRP13569 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.72□□□□□ -1.17
CFTRP13569 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC7.72□□□□□ -1.17
CFTRP13569 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CFTRP13569 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CFTRP13569 AC008549.2-201ENST00000333482 706 ntBASIC7.72□□□□□ -1.17
CFTRP13569 SNORD46.1-201ENST00000364139 104 ntBASIC7.72□□□□□ -1.17
CFTRP13569 RN7SKP159-201ENST00000410657 292 ntBASIC7.72□□□□□ -1.17
CFTRP13569 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.72□□□□□ -1.17
CFTRP13569 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC7.72□□□□□ -1.17
CFTRP13569 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.72□□□□□ -1.17
CFTRP13569 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 AC027228.2-201ENST00000567141 2154 ntBASIC7.72□□□□□ -1.17
CFTRP13569 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 ARHGAP42P3-201ENST00000443989 2508 ntBASIC7.72□□□□□ -1.17
CFTRP13569 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CFTRP13569 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CFTRP13569 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.17
CFTRP13569 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CFTRP13569 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
CFTRP13569 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CFTRP13569 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
CFTRP13569 RNA5SP387-201ENST00000364226 106 ntBASIC7.71□□□□□ -1.18
CFTRP13569 5S_rRNA.1-201ENST00000364415 116 ntBASIC7.71□□□□□ -1.18
CFTRP13569 AL672167.2-201ENST00000377164 879 ntBASIC7.71□□□□□ -1.18
CFTRP13569 RPL21P67-201ENST00000402896 478 ntBASIC7.71□□□□□ -1.18
CFTRP13569 AC009237.5-201ENST00000414271 501 ntBASIC7.71□□□□□ -1.18
CFTRP13569 RPL37P1-201ENST00000432310 284 ntBASIC7.71□□□□□ -1.18
CFTRP13569 AC114495.1-201ENST00000441274 436 ntBASIC7.71□□□□□ -1.18
CFTRP13569 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.71□□□□□ -1.18
CFTRP13569 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC7.71□□□□□ -1.18
CFTRP13569 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
CFTRP13569 PARP4P3-201ENST00000510265 317 ntBASIC7.71□□□□□ -1.18
CFTRP13569 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
CFTRP13569 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.71□□□□□ -1.18
CFTRP13569 AC090181.2-201ENST00000602975 672 ntBASIC7.71□□□□□ -1.18
CFTRP13569 AC023762.1-201ENST00000603280 584 ntBASIC7.71□□□□□ -1.18
CFTRP13569 AC024220.1-201ENST00000603675 484 ntBASIC7.71□□□□□ -1.18
CFTRP13569 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CFTRP13569 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CFTRP13569 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CFTRP13569 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CFTRP13569 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CFTRP13569 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CFTRP13569 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CFTRP13569 AL627171.1-201ENST00000618845 1308 ntBASIC7.7□□□□□ -1.18
CFTRP13569 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.7□□□□□ -1.18
CFTRP13569 SNORA62.3-201ENST00000365110 153 ntBASIC7.7□□□□□ -1.18
CFTRP13569 MIR3065-201ENST00000390137 79 ntBASIC7.7□□□□□ -1.18
CFTRP13569 RPL21P65-201ENST00000406094 466 ntBASIC7.7□□□□□ -1.18
CFTRP13569 SNORA11.1-201ENST00000408133 129 ntBASIC7.7□□□□□ -1.18
CFTRP13569 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.7□□□□□ -1.18
CFTRP13569 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.7□□□□□ -1.18
CFTRP13569 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CFTRP13569 PRSS3P4-201ENST00000453323 162 ntBASIC7.7□□□□□ -1.18
CFTRP13569 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
CFTRP13569 FTH1P21-201ENST00000512179 511 ntBASIC7.7□□□□□ -1.18
CFTRP13569 AC105031.1-201ENST00000518550 476 ntBASIC7.7□□□□□ -1.18
CFTRP13569 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC7.7□□□□□ -1.18
CFTRP13569 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms