Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC1P07992 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC1P07992 RNA5SP90-201ENST00000364801 99 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 NUDT19P3-201ENST00000404698 555 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC1P07992 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.45□□□□□ -1.7
ERCC1P07992 AC007394.1-201ENST00000421941 531 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC1P07992 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 CALM1P2-201ENST00000452941 448 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 RPL31P53-201ENST00000457065 348 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 AC005412.2-201ENST00000492004 341 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 RN7SL441P-201ENST00000492388 296 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.45□□□□□ -1.7
ERCC1P07992 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC1P07992 NDUFB5P1-201ENST00000508134 564 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.45□□□□□ -1.7
ERCC1P07992 RN7SKP46-201ENST00000515942 234 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 RN7SKP147-201ENST00000517154 244 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC1P07992 NPM1P35-201ENST00000533043 868 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC1P07992 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC1P07992 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC1P07992 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC1P07992 AP000919.1-201ENST00000582850 985 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
ERCC1P07992 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.45□□□□□ -1.7
ERCC1P07992 AC011487.3-201ENST00000593607 453 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 AC005084.1-201ENST00000605160 304 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.45□□□□□ -1.7
ERCC1P07992 AC131238.1-201ENST00000617135 328 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC1P07992 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
ERCC1P07992 AC087190.4-201ENST00000574616 8334 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC1P07992 AC120338.1-201ENST00000625074 1541 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 AC073429.2-201ENST00000569694 1444 ntBASIC4.45□□□□□ -1.7
ERCC1P07992 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC1P07992 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
ERCC1P07992 AC010329.2-201ENST00000595195 2737 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC1P07992 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC1P07992 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
ERCC1P07992 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
ERCC1P07992 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 CASC19-204ENST00000641001 2055 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC1P07992 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
ERCC1P07992 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC1P07992 OR4K12P-201ENST00000406538 961 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.44□□□□□ -1.7
ERCC1P07992 AL139128.1-201ENST00000413921 941 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.44□□□□□ -1.7
ERCC1P07992 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.44□□□□□ -1.7
ERCC1P07992 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.44□□□□□ -1.7
ERCC1P07992 GLUD1P9-201ENST00000420997 1173 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.44□□□□□ -1.7
ERCC1P07992 RPS26P47-201ENST00000427219 348 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.44□□□□□ -1.7
ERCC1P07992 AC093716.1-201ENST00000435923 377 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.44□□□□□ -1.7
ERCC1P07992 CCRL1P1-201ENST00000449542 1053 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.44□□□□□ -1.7
ERCC1P07992 CLIC4P1-201ENST00000453177 535 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.44□□□□□ -1.7
ERCC1P07992 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.44□□□□□ -1.7
ERCC1P07992 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.44□□□□□ -1.7
ERCC1P07992 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.44□□□□□ -1.7
ERCC1P07992 AC134349.2-201ENST00000535136 910 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.44□□□□□ -1.7
ERCC1P07992 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.44□□□□□ -1.7
ERCC1P07992 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.44□□□□□ -1.7
ERCC1P07992 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.44□□□□□ -1.7
ERCC1P07992 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
ERCC1P07992 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.44□□□□□ -1.7
ERCC1P07992 AP005131.7-201ENST00000610087 611 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC1P07992 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC1P07992 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
ERCC1P07992 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC1P07992 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC1P07992 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
ERCC1P07992 AC092079.1-201ENST00000558620 1985 ntBASIC4.44□□□□□ -1.7
ERCC1P07992 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ERCC1P07992 CASC19-284ENST00000642142 1868 ntBASIC4.43□□□□□ -1.7
ERCC1P07992 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC1P07992 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.43□□□□□ -1.7
ERCC1P07992 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
ERCC1P07992 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC1P07992 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC1P07992 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ERCC1P07992 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC1P07992 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC1P07992 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ERCC1P07992 U3.2-201ENST00000362981 210 ntBASIC4.43□□□□□ -1.7
ERCC1P07992 RN7SKP103-201ENST00000363848 320 ntBASIC4.43□□□□□ -1.7
ERCC1P07992 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.43□□□□□ -1.7
ERCC1P07992 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC1P07992 U3.32-201ENST00000408116 212 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms