Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MIR298-201ENST00000401212 88 ntBASIC5.45□□□□□ -1.54
RB1P06400 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.45□□□□□ -1.54
RB1P06400 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.45□□□□□ -1.54
RB1P06400 CYCSP53-201ENST00000455540 265 ntBASIC5.45□□□□□ -1.54
RB1P06400 snoU13.1-201ENST00000459157 104 ntBASIC5.45□□□□□ -1.54
RB1P06400 AL049829.1-201ENST00000465411 156 ntBASIC5.45□□□□□ -1.54
RB1P06400 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.45□□□□□ -1.54
RB1P06400 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.45□□□□□ -1.54
RB1P06400 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.45□□□□□ -1.54
RB1P06400 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.45□□□□□ -1.54
RB1P06400 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.45□□□□□ -1.54
RB1P06400 MIR3908-201ENST00000579798 126 ntBASIC5.45□□□□□ -1.54
RB1P06400 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 KATNBL1P5-201ENST00000605015 517 ntBASIC5.45□□□□□ -1.54
RB1P06400 AC004775.1-201ENST00000607389 753 ntBASIC5.45□□□□□ -1.54
RB1P06400 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 AC091932.2-201ENST00000623014 291 ntBASIC5.45□□□□□ -1.54
RB1P06400 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 AC100757.1-201ENST00000616872 1835 ntBASIC5.45□□□□□ -1.54
RB1P06400 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RB1P06400 RLIMP2-201ENST00000427891 1563 ntBASIC5.45□□□□□ -1.54
RB1P06400 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 AC138907.8-201ENST00000623981 2256 ntBASIC5.45□□□□□ -1.54
RB1P06400 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RB1P06400 AC007342.7-201ENST00000624610 2337 ntBASIC5.45□□□□□ -1.54
RB1P06400 UGT2B26P-201ENST00000508672 1613 ntBASIC5.45□□□□□ -1.54
RB1P06400 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.44□□□□□ -1.54
RB1P06400 AL512283.1-201ENST00000606756 1384 ntBASIC5.44□□□□□ -1.54
RB1P06400 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RB1P06400 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RB1P06400 AC126755.2-208ENST00000327792 462 ntBASIC5.44□□□□□ -1.54
RB1P06400 AC138969.1-213ENST00000331436 462 ntBASIC5.44□□□□□ -1.54
RB1P06400 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RB1P06400 OR6K3-202ENST00000368146 996 ntBASIC5.44□□□□□ -1.54
RB1P06400 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 RN7SKP100-201ENST00000411258 284 ntBASIC5.44□□□□□ -1.54
RB1P06400 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.44□□□□□ -1.54
RB1P06400 AL590806.1-201ENST00000415818 853 ntBASIC5.44□□□□□ -1.54
RB1P06400 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.44□□□□□ -1.54
RB1P06400 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.44□□□□□ -1.54
RB1P06400 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.44□□□□□ -1.54
RB1P06400 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.44□□□□□ -1.54
RB1P06400 CYCSP42-201ENST00000450823 238 ntBASIC5.44□□□□□ -1.54
RB1P06400 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.44□□□□□ -1.54
RB1P06400 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.44□□□□□ -1.54
RB1P06400 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RB1P06400 RN7SL189P-201ENST00000468631 289 ntBASIC5.44□□□□□ -1.54
RB1P06400 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.44□□□□□ -1.54
RB1P06400 SUMO1P1-201ENST00000497904 306 ntBASIC5.44□□□□□ -1.54
RB1P06400 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.44□□□□□ -1.54
RB1P06400 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.44□□□□□ -1.54
RB1P06400 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.44□□□□□ -1.54
RB1P06400 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.44□□□□□ -1.54
RB1P06400 AC111000.6-201ENST00000514471 709 ntBASIC5.44□□□□□ -1.54
RB1P06400 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.44□□□□□ -1.54
RB1P06400 OR4A17P-201ENST00000526032 904 ntBASIC5.44□□□□□ -1.54
RB1P06400 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.44□□□□□ -1.54
RB1P06400 AC122134.1-201ENST00000565664 1104 ntBASIC5.44□□□□□ -1.54
RB1P06400 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.44□□□□□ -1.54
RB1P06400 MTND4LP25-201ENST00000570218 163 ntBASIC5.44□□□□□ -1.54
RB1P06400 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.44□□□□□ -1.54
RB1P06400 AC135178.6-201ENST00000605314 398 ntBASIC5.44□□□□□ -1.54
RB1P06400 AC034236.3-201ENST00000605999 461 ntBASIC5.44□□□□□ -1.54
RB1P06400 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.44□□□□□ -1.54
RB1P06400 AL356274.1-201ENST00000617064 410 ntBASIC5.44□□□□□ -1.54
RB1P06400 AC093775.1-201ENST00000624154 1868 ntBASIC5.44□□□□□ -1.54
RB1P06400 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
RB1P06400 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.44□□□□□ -1.54
RB1P06400 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 AC004076.2-201ENST00000620532 3323 ntBASIC5.44□□□□□ -1.54
RB1P06400 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.44□□□□□ -1.54
RB1P06400 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.44□□□□□ -1.54
RB1P06400 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.44□□□□□ -1.54
RB1P06400 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RB1P06400 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RB1P06400 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.43□□□□□ -1.54
RB1P06400 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.43□□□□□ -1.54
RB1P06400 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
RB1P06400 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RB1P06400 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RB1P06400 AL121950.1-201ENST00000624993 2077 ntBASIC5.43□□□□□ -1.54
RB1P06400 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RB1P06400 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms