Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR3138-201ENST00000585238 82 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 AC020634.1-201ENST00000608701 549 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.56□□□□□ -1.52
COL1A1P02452 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL1A1P02452 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL1A1P02452 AC104623.2-202ENST00000623477 4002 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL1A1P02452 UGT2B26P-201ENST00000508672 1613 ntBASIC5.55□□□□□ -1.52
COL1A1P02452 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL1A1P02452 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL1A1P02452 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.55□□□□□ -1.52
COL1A1P02452 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL1A1P02452 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
COL1A1P02452 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.55□□□□□ -1.52
COL1A1P02452 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL1A1P02452 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL1A1P02452 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
COL1A1P02452 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL1A1P02452 NPM1P37-201ENST00000403105 874 ntBASIC5.55□□□□□ -1.52
COL1A1P02452 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.55□□□□□ -1.52
COL1A1P02452 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.55□□□□□ -1.52
COL1A1P02452 TMSB10P2-201ENST00000416049 131 ntBASIC5.55□□□□□ -1.52
COL1A1P02452 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.55□□□□□ -1.52
COL1A1P02452 TDGF1P1-201ENST00000445734 527 ntBASIC5.55□□□□□ -1.52
COL1A1P02452 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.55□□□□□ -1.52
COL1A1P02452 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.55□□□□□ -1.52
COL1A1P02452 AL935212.3-201ENST00000450729 284 ntBASIC5.55□□□□□ -1.52
COL1A1P02452 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.55□□□□□ -1.52
COL1A1P02452 MTCO1P35-201ENST00000515270 228 ntBASIC5.55□□□□□ -1.52
COL1A1P02452 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.55□□□□□ -1.52
COL1A1P02452 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL1A1P02452 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.55□□□□□ -1.52
COL1A1P02452 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.55□□□□□ -1.52
COL1A1P02452 AC024941.1-201ENST00000612250 334 ntBASIC5.55□□□□□ -1.52
COL1A1P02452 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.55□□□□□ -1.52
COL1A1P02452 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL1A1P02452 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.55□□□□□ -1.52
COL1A1P02452 AL391684.1-202ENST00000641293 1636 ntBASIC5.55□□□□□ -1.52
COL1A1P02452 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL1A1P02452 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
COL1A1P02452 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.54□□□□□ -1.52
COL1A1P02452 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL1A1P02452 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
COL1A1P02452 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.54□□□□□ -1.52
COL1A1P02452 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL1A1P02452 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
COL1A1P02452 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
COL1A1P02452 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL1A1P02452 Z98745.1-201ENST00000402553 494 ntBASIC5.54□□□□□ -1.52
COL1A1P02452 AL358178.1-201ENST00000407698 397 ntBASIC5.54□□□□□ -1.52
COL1A1P02452 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.54□□□□□ -1.52
COL1A1P02452 AL358176.3-201ENST00000420757 454 ntBASIC5.54□□□□□ -1.52
COL1A1P02452 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.54□□□□□ -1.52
COL1A1P02452 RN7SL303P-201ENST00000469773 251 ntBASIC5.54□□□□□ -1.52
COL1A1P02452 RPL7P19-201ENST00000469948 618 ntBASIC5.54□□□□□ -1.52
COL1A1P02452 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.54□□□□□ -1.52
COL1A1P02452 RN7SL810P-201ENST00000493031 276 ntBASIC5.54□□□□□ -1.52
COL1A1P02452 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL1A1P02452 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.54□□□□□ -1.52
COL1A1P02452 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.54□□□□□ -1.52
COL1A1P02452 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.54□□□□□ -1.52
COL1A1P02452 CCDC58P3-201ENST00000590792 430 ntBASIC5.54□□□□□ -1.52
COL1A1P02452 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.54□□□□□ -1.52
COL1A1P02452 AC090181.2-201ENST00000602975 672 ntBASIC5.54□□□□□ -1.52
COL1A1P02452 AC114781.5-201ENST00000615297 108 ntBASIC5.54□□□□□ -1.52
COL1A1P02452 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL1A1P02452 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL1A1P02452 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL1A1P02452 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL1A1P02452 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL1A1P02452 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL1A1P02452 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL1A1P02452 STX3-208ENST00000641815 3236 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL1A1P02452 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL1A1P02452 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.53□□□□□ -1.52
COL1A1P02452 AL158073.1-201ENST00000426848 1104 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.53□□□□□ -1.52
COL1A1P02452 AC122718.1-201ENST00000439448 744 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.53□□□□□ -1.52
COL1A1P02452 FAM133DP-201ENST00000464802 691 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 AK4P6-201ENST00000505168 528 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.53□□□□□ -1.52
COL1A1P02452 TRAV8-5-201ENST00000537369 341 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 AP001160.4-201ENST00000596971 382 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 AC023043.4-201ENST00000612081 449 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 AC011815.3-201ENST00000624194 473 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 OR2L1P-202ENST00000641567 1023 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.53□□□□□ -1.52
COL1A1P02452 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL1A1P02452 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.53□□□□□ -1.52
COL1A1P02452 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL1A1P02452 CASC19-206ENST00000641028 1430 ntBASIC5.53□□□□□ -1.52
COL1A1P02452 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL1A1P02452 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL1A1P02452 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.53□□□□□ -1.52
COL1A1P02452 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.52
COL1A1P02452 AC008033.1-201ENST00000216407 1162 ntBASIC5.52□□□□□ -1.53
COL1A1P02452 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms