Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.69□□□□□ -1.5
CNOT4O95628 IGKV2D-10-201ENST00000520194 281 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 IGHV4-55-201ENST00000520889 368 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 OR5AZ1P-201ENST00000527448 943 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 AC008055.1-201ENST00000547032 609 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.69□□□□□ -1.5
CNOT4O95628 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.69□□□□□ -1.5
CNOT4O95628 SERPINE4P-201ENST00000554978 281 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.69□□□□□ -1.5
CNOT4O95628 AL078601.3-201ENST00000573303 535 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.69□□□□□ -1.5
CNOT4O95628 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.69□□□□□ -1.5
CNOT4O95628 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AC008083.4-201ENST00000615076 444 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AL607023.1-201ENST00000620045 248 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 AC022509.4-201ENST00000621404 572 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AC012254.5-201ENST00000623573 478 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.69□□□□□ -1.5
CNOT4O95628 AL132640.3-201ENST00000630473 177 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.69□□□□□ -1.5
CNOT4O95628 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
CNOT4O95628 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 AP002370.1-201ENST00000528055 1602 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AC005332.9-201ENST00000620266 2921 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CNOT4O95628 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 AC013488.1-201ENST00000526618 1838 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.68□□□□□ -1.5
CNOT4O95628 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.68□□□□□ -1.5
CNOT4O95628 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNOT4O95628 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.68□□□□□ -1.5
CNOT4O95628 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CNOT4O95628 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CNOT4O95628 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.68□□□□□ -1.5
CNOT4O95628 GTF2H2B-203ENST00000508065 1432 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 DDX18P4-201ENST00000511690 1966 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AC073055.1-201ENST00000456901 1621 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AC022034.1-201ENST00000512867 2156 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 FAM32BP-201ENST00000344033 333 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 RNU4-21P-201ENST00000362802 126 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 RPL23AP59-201ENST00000399415 461 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 OR2W4P-201ENST00000406496 926 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 RN7SKP108-201ENST00000411367 328 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 HMGB3P31-201ENST00000413333 595 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 CEACAMP8-201ENST00000413902 580 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.68□□□□□ -1.5
CNOT4O95628 RPL6P29-201ENST00000414863 865 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 AL513325.1-201ENST00000417716 1034 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 LINC01347-201ENST00000417964 355 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AC027644.1-201ENST00000419595 298 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AL022400.1-201ENST00000423946 935 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.68□□□□□ -1.5
CNOT4O95628 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 AC005297.1-201ENST00000444765 862 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AL671855.1-201ENST00000446875 1203 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.68□□□□□ -1.5
CNOT4O95628 AC094085.1-201ENST00000468914 584 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
CNOT4O95628 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.68□□□□□ -1.5
CNOT4O95628 BNIP3P41-201ENST00000503774 571 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.68□□□□□ -1.5
CNOT4O95628 IGKV1D-22-201ENST00000518953 324 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 AP004609.2-201ENST00000532177 190 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.68□□□□□ -1.5
CNOT4O95628 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.68□□□□□ -1.5
CNOT4O95628 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNOT4O95628 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.68□□□□□ -1.5
CNOT4O95628 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.68□□□□□ -1.5
CNOT4O95628 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.68□□□□□ -1.5
CNOT4O95628 AC090186.1-201ENST00000605991 572 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AL021368.3-201ENST00000607119 578 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AL391497.1-201ENST00000608671 547 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 AC016769.4-201ENST00000616893 535 ntBASIC5.68□□□□□ -1.5
CNOT4O95628 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.68□□□□□ -1.5
CNOT4O95628 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms