Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FCF1P5-201ENST00000406490 482 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.55□□□□□ -1.52
PHGDHO43175 AC107081.1-201ENST00000414975 361 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 AC114814.2-201ENST00000419195 485 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.55□□□□□ -1.52
PHGDHO43175 AC009784.1-201ENST00000426484 460 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 NPM1P22-201ENST00000427761 952 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 AP001324.1-201ENST00000428553 399 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.55□□□□□ -1.52
PHGDHO43175 NDUFB4P8-201ENST00000435351 367 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.55□□□□□ -1.52
PHGDHO43175 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.55□□□□□ -1.52
PHGDHO43175 VN1R40P-201ENST00000455196 941 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 USP9YP25-201ENST00000457708 443 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.55□□□□□ -1.52
PHGDHO43175 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.55□□□□□ -1.52
PHGDHO43175 AC091951.3-201ENST00000504093 246 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.55□□□□□ -1.52
PHGDHO43175 RN7SKP70-201ENST00000516655 271 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.55□□□□□ -1.52
PHGDHO43175 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.55□□□□□ -1.52
PHGDHO43175 TRIM51DP-201ENST00000529746 596 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.55□□□□□ -1.52
PHGDHO43175 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.55□□□□□ -1.52
PHGDHO43175 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.55□□□□□ -1.52
PHGDHO43175 AC107958.1-201ENST00000556576 290 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.55□□□□□ -1.52
PHGDHO43175 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.55□□□□□ -1.52
PHGDHO43175 VN1R88P-201ENST00000596787 292 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.55□□□□□ -1.52
PHGDHO43175 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.55□□□□□ -1.52
PHGDHO43175 AC092954.1-201ENST00000609121 445 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 AC091304.6-201ENST00000619761 202 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 AP003485.2-201ENST00000623636 610 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.55□□□□□ -1.52
PHGDHO43175 AL031595.2-201ENST00000624215 19071 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
PHGDHO43175 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PHGDHO43175 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
PHGDHO43175 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.55□□□□□ -1.52
PHGDHO43175 AC079097.1-201ENST00000512187 1399 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PHGDHO43175 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PHGDHO43175 MRE11P1-201ENST00000464884 2127 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 MAPK10-328ENST00000641553 4009 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.54□□□□□ -1.52
PHGDHO43175 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
PHGDHO43175 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PHGDHO43175 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.54□□□□□ -1.52
PHGDHO43175 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 SNORA64.1-201ENST00000362600 132 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 SUGT1P2-201ENST00000379452 992 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 OR52E6-202ENST00000379946 954 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PHGDHO43175 AC004386.1-201ENST00000393214 761 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 VN1R12P-201ENST00000403778 876 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 RPL24P2-201ENST00000421023 475 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 OR5AW1P-201ENST00000426334 1006 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.54□□□□□ -1.52
PHGDHO43175 MTCO3P21-201ENST00000430791 643 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.54□□□□□ -1.52
PHGDHO43175 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.54□□□□□ -1.52
PHGDHO43175 HMGB3P24-201ENST00000433260 622 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AC110602.1-201ENST00000437414 318 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AL031663.1-201ENST00000437445 219 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 CBX1P4-201ENST00000439415 457 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AL596266.1-201ENST00000448132 400 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.54□□□□□ -1.52
PHGDHO43175 RPS23P6-201ENST00000466136 431 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AP002884.1-201ENST00000479691 655 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AC022215.1-201ENST00000481770 362 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 AC113347.3-201ENST00000509113 148 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 IGJP1-201ENST00000522682 475 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AC010306.1-201ENST00000523223 1117 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.54□□□□□ -1.52
PHGDHO43175 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.54□□□□□ -1.52
PHGDHO43175 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.54□□□□□ -1.52
PHGDHO43175 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.54□□□□□ -1.52
PHGDHO43175 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.54□□□□□ -1.52
PHGDHO43175 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.54□□□□□ -1.52
PHGDHO43175 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.54□□□□□ -1.52
PHGDHO43175 AC016839.1-201ENST00000578162 867 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms