Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 RN7SKP59-201ENST00000410520 314 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM1O00151 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM1O00151 AC004552.1-201ENST00000419089 348 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM1O00151 AL590609.2-201ENST00000421430 368 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 AC007064.3-201ENST00000422608 359 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 DSTNP5-201ENST00000427921 523 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 AL161722.2-201ENST00000434731 981 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM1O00151 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.77□□□□□ -1.65
PDLIM1O00151 GAPDHP25-201ENST00000447061 1001 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 HSPE1P22-201ENST00000456856 327 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 RPS26P3-201ENST00000470205 348 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 AC090543.2-201ENST00000483963 348 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 AC004057.1-201ENST00000485827 348 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM1O00151 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM1O00151 RNU6-319P-201ENST00000516025 108 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM1O00151 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PDLIM1O00151 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM1O00151 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM1O00151 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM1O00151 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM1O00151 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM1O00151 AC004948.1-201ENST00000609858 672 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM1O00151 AL669942.2-201ENST00000620352 697 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 AC004232.3-201ENST00000622977 525 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM1O00151 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM1O00151 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM1O00151 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM1O00151 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PDLIM1O00151 OR10AB1P-202ENST00000641219 1686 ntBASIC4.77□□□□□ -1.65
PDLIM1O00151 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PDLIM1O00151 AC087190.4-201ENST00000574616 8334 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDLIM1O00151 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM1O00151 MAPK10-320ENST00000641462 6696 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.76□□□□□ -1.65
PDLIM1O00151 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 RNU6-618P-201ENST00000363518 112 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 RHOT1P2-201ENST00000366423 333 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 RNU1-77P-201ENST00000390868 162 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
PDLIM1O00151 AL607077.1-201ENST00000401718 499 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 RNA5SP39-201ENST00000411245 120 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 NMNAT1P2-201ENST00000435192 860 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM1O00151 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM1O00151 AC022336.1-201ENST00000475510 337 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 UBA52P7-201ENST00000486088 380 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 AC024558.1-201ENST00000505008 528 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 PGAM1P13-201ENST00000507497 754 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM1O00151 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.76□□□□□ -1.65
PDLIM1O00151 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM1O00151 BUD31P1-201ENST00000521828 359 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM1O00151 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.76□□□□□ -1.65
PDLIM1O00151 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 CYCSP40-201ENST00000575927 294 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.76□□□□□ -1.65
PDLIM1O00151 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM1O00151 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM1O00151 AC008536.1-201ENST00000602872 669 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 AL139286.1-201ENST00000604465 483 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.76□□□□□ -1.65
PDLIM1O00151 AP002967.1-201ENST00000624203 539 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 AC136428.4-201ENST00000634254 1155 ntBASIC4.76□□□□□ -1.65
PDLIM1O00151 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.76□□□□□ -1.65
PDLIM1O00151 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM1O00151 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PDLIM1O00151 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PDLIM1O00151 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
PDLIM1O00151 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM1O00151 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM1O00151 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms