Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 IGLV3-30-201ENST00000524362 298 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 YWHABP2-201ENST00000540201 713 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 OLR1-209ENST00000543993 822 ntTSL 2 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RPA2P1-201ENST00000556557 721 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 MRPS21P7-201ENST00000566937 238 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AP005119.1-201ENST00000580956 292 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC090236.2-201ENST00000587933 1101 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC005255.1-201ENST00000593748 216 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC130352.1-201ENST00000602979 661 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC008814.1-201ENST00000603797 406 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 IGKV2OR2-1-201ENST00000605129 304 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 PPATP2-201ENST00000605635 508 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RN7SL722P-201ENST00000617780 284 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RN7SL565P-201ENST00000618246 284 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AL136228.1-201ENST00000622221 319 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC133485.6-201ENST00000624045 688 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC004943.3-201ENST00000624116 600 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC011815.3-201ENST00000624194 473 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC135068.12-201ENST00000637370 931 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC074101.1-201ENST00000637861 241 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC217777.1-201ENST00000570034 1471 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC009313.2-201ENST00000417893 1941 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC093010.3-201ENST00000570269 15214 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC010928.1-201ENST00000592477 1447 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AL138847.1-201ENST00000258651 546 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 OR52B3P-201ENST00000314715 928 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 LRRC37BP1-201ENST00000398851 714 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 MTCO3P31-201ENST00000405526 789 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AL732292.1-201ENST00000426692 226 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 HMGB3P24-201ENST00000433260 622 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 DNAJA1P5-201ENST00000440278 943 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 RPL7AP61-201ENST00000443410 636 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AL137845.2-201ENST00000444292 988 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AL450996.1-201ENST00000445574 1202 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 RPS27AP15-201ENST00000447672 466 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 VDAC2P4-201ENST00000452925 711 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AL034369.1-201ENST00000453808 477 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AP000547.1-201ENST00000454360 617 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC118758.1-202ENST00000454719 225 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 RPSAP37-201ENST00000470913 821 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC021146.1-201ENST00000511202 716 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 IGKV2-23-201ENST00000518729 323 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 IGLVI-70-201ENST00000523272 390 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AP002004.1-206ENST00000532441 876 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AL512310.9-201ENST00000553311 948 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 MIR4716-201ENST00000579628 84 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 SNORA74C-1-201ENST00000580726 201 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms