Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 RN7SKP199-201ENST00000410325 305 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 RNU2-22P-201ENST00000411266 212 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC093414.1-201ENST00000434712 514 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL031584.1-201ENST00000447169 754 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL356981.1-201ENST00000454879 684 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC112206.1-201ENST00000468416 477 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC116562.1-201ENST00000485355 781 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 ARL4AP1-201ENST00000503220 705 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 PRELID3BP5-201ENST00000508612 460 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 HPRT1P1-201ENST00000509498 657 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC105031.1-201ENST00000518550 476 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 MIR8069-1-201ENST00000616627 86 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 MIR8069-2-201ENST00000621412 86 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC243960.7-201ENST00000623532 707 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 MFSD8-216ENST00000641147 4009 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL356967.1-201ENST00000406305 431 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 EIF4A1P1-201ENST00000420241 934 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 BX323845.1-201ENST00000432417 179 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL591623.2-201ENST00000449978 222 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL445433.1-201ENST00000457507 257 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC034205.1-201ENST00000520621 638 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AP001880.2-201ENST00000538233 448 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 TOMM20P2-201ENST00000540082 421 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL512310.9-201ENST00000553311 948 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 RN7SL690P-201ENST00000582087 240 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AP000919.1-201ENST00000582850 985 ntBASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.73□□□□□ -1.65
TMX2-CTNND1H3BSU7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 RBPJP2-201ENST00000618187 1444 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 UGT2B26P-201ENST00000508672 1613 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC01109-201ENST00000603837 3081 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 GLULP6-201ENST00000399502 913 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 TRGV5P-201ENST00000419915 354 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC016712.1-201ENST00000431088 378 ntBASIC4.72□□□□□ -1.65
TMX2-CTNND1H3BSU7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms