Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RN7SL244P-201ENST00000493405 297 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 RPL37AP8-201ENST00000494116 276 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 BTG4P1-201ENST00000510421 183 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 AC016559.2-201ENST00000510759 359 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 RNU6-362P-201ENST00000516736 90 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 AC092868.3-201ENST00000560515 784 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 MIR4691-201ENST00000583764 85 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 BNIP3P35-201ENST00000604530 490 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 AC087783.2-201ENST00000605070 562 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 AC100814.1-201ENST00000606963 623 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 AC107308.1-201ENST00000615897 301 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.64□□□□□ -1.67
NPIPA2E9PIF3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 OR51C1P-202ENST00000641159 1444 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC006210.2-201ENST00000367074 1545 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 RNA5SP443-201ENST00000363083 132 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 NPM1P10-201ENST00000398310 865 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AL078599.1-201ENST00000402075 293 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 BTF3P9-201ENST00000418784 283 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC006065.1-201ENST00000422539 802 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 MTCO1P57-201ENST00000432182 261 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AL049745.1-201ENST00000433953 286 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 CYCSP11-201ENST00000436426 315 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 RPL31P44-201ENST00000447680 377 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC091180.1-201ENST00000462104 372 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC067904.2-201ENST00000517322 1283 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 EDDM3DP-201ENST00000554692 434 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 MTCYBP13-201ENST00000578634 1093 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 MIR4472-2-201ENST00000582069 67 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 PRPF19P1-201ENST00000584766 898 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC239803.2-201ENST00000610161 430 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AP002967.1-201ENST00000624203 539 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC019080.5-201ENST00000624891 757 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC015813.6-201ENST00000624409 5808 ntBASIC4.63□□□□□ -1.67
NPIPA2E9PIF3 AC104623.2-202ENST00000623477 4002 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms