Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CDC27P2-201ENST00000425026 1922 ntBASIC5.21□□□□□ -1.57
TCRBV7S3A2A0A539 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 RPL5P19-201ENST00000404228 893 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 MIR1182-201ENST00000408363 97 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC023128.2-201ENST00000420880 1223 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 BX323845.1-201ENST00000432417 179 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 ELOCP11-201ENST00000436690 332 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC000041.1-201ENST00000439655 175 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 MTCO1P53-201ENST00000441633 699 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 ELOCP16-201ENST00000444494 332 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 CDH12P2-201ENST00000504393 298 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 RPS4XP20-201ENST00000505751 772 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 SNORA19.3-201ENST00000516165 130 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 RNU6-1308P-201ENST00000516817 103 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC091163.3-201ENST00000518269 1144 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC011840.5-201ENST00000582125 771 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AL357094.1-201ENST00000603845 844 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC098935.2-201ENST00000604222 466 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AL589674.2-201ENST00000604304 337 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC011374.2-201ENST00000607135 526 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC138965.3-201ENST00000623875 498 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 AC132825.7-201ENST00000638744 335 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 OR6C71P-202ENST00000641886 1107 ntBASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TCRBV7S3A2A0A539 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 BX284613.1-201ENST00000452221 1641 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 U3.2-201ENST00000362981 210 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 SNORA2.3-201ENST00000383920 135 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 RNU4-31P-201ENST00000384211 141 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 RNU6-1263P-201ENST00000384601 106 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 MIR621-201ENST00000384919 96 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC009804.1-201ENST00000400949 179 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 OR5M12P-201ENST00000423388 929 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 NANOGP4-201ENST00000427230 913 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC104843.2-201ENST00000427666 297 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 ETF1P3-201ENST00000430422 1160 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 HMGB3P10-201ENST00000434734 572 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 MTND1P26-201ENST00000440488 538 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC012512.1-201ENST00000446594 718 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL096803.2-201ENST00000450032 677 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 Z95152.1-201ENST00000453556 656 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AL356981.1-201ENST00000454879 684 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC023141.9-201ENST00000458734 412 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC093720.1-201ENST00000505681 714 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC147055.3-201ENST00000510547 851 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 AC109635.6-201ENST00000525487 1113 ntBASIC5.2□□□□□ -1.58
TCRBV7S3A2A0A539 OR8K4P-201ENST00000534608 872 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms