Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AL121657.1-201ENST00000327215 531 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AC020890.1-201ENST00000491837 504 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AP000827.1-201ENST00000527814 258 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AC015912.2-201ENST00000571053 181 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AL035461.2-201ENST00000619201 524 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AC009120.7-201ENST00000623452 780 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 STX3-208ENST00000641815 3236 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AL450345.1-202ENST00000605741 3881 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 UGT2B26P-201ENST00000508672 1613 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 MIR4660-201ENST00000583549 74 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 BNIP3P11-201ENST00000603878 563 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 AL031658.2-201ENST00000616850 651 ntBASIC6.92□□□□□ -1.3
SHANK2Q9UPX8 ICE2P1-201ENST00000512800 1849 ntBASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 CPHL1P-201ENST00000461341 3407 ntBASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 RPL23AP83-201ENST00000434984 473 ntBASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 VN1R34P-201ENST00000447387 883 ntBASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 OR4A2P-201ENST00000527276 913 ntBASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 NPM1P5-201ENST00000557228 838 ntBASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHANK2Q9UPX8 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SHANK2Q9UPX8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.9□□□□□ -1.3
SHANK2Q9UPX8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SHANK2Q9UPX8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SHANK2Q9UPX8 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 Z98745.1-201ENST00000402553 494 ntBASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 E2F6P2-201ENST00000420708 748 ntBASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 RCC2P2-201ENST00000422174 918 ntBASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 RPS3AP54-201ENST00000435535 734 ntBASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 AL935212.3-201ENST00000450729 284 ntBASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 RPL21P126-201ENST00000470049 478 ntBASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 OR8A2P-201ENST00000528631 952 ntBASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 AC025884.1-201ENST00000556034 378 ntBASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 OR8G7P-201ENST00000616658 848 ntBASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 DDX18P5-201ENST00000534547 1306 ntBASIC6.9□□□□□ -1.31
SHANK2Q9UPX8 LINC00622-201ENST00000562811 1570 ntBASIC6.89□□□□□ -1.31
SHANK2Q9UPX8 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.89□□□□□ -1.31
SHANK2Q9UPX8 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
SHANK2Q9UPX8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
SHANK2Q9UPX8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SHANK2Q9UPX8 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SHANK2Q9UPX8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
SHANK2Q9UPX8 AL672167.2-201ENST00000377164 879 ntBASIC6.89□□□□□ -1.31
SHANK2Q9UPX8 RNA5SP317-201ENST00000410176 116 ntBASIC6.89□□□□□ -1.31
SHANK2Q9UPX8 RNA5SP311-201ENST00000411290 116 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms